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Query: sp|Q9NPG2|NGB_HUMAN Neuroglobin OS=Homo sapiens GN=NGB PE=1 SV=1, from H.sapiens

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MERPEPELIRQSWRAVSRSPLEHGTVLFARLFALEPDLLPLFQYNCRQFSSPEDCLSSPEFLDHIRKVMLVIDAAVTNVEDLSSLEEYLASLGRKHRAVGVKLSSFSTVGESLLYMLEKCLGPAFTPATRAAWSQLYGAVVQAMSRGWDGELast
1 -4.510PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]  ali follow..  14  258.FQPSDSLMTETLARVEQKNFSKAKQAYRILSLKYPEKSGFF............................................................................................................. 300
2 -4.270HGC00915 gi|162810474|dbj|BABA01034235.1|2.0 TMP01234;  ali follow..  14  1.......................................................................MSKKKRGEERMKEEDNILKKVGKKN-SFKVPEGYFENLTSEVMGKLPE................................ 47
3 -3.900PB019388 gi|83589066|ref|YP_429075.1| Radical SAM [Moorella thermoacetica ATCC 39073]gi|83571980|gb|ABC18532.1| Radical SAM [Moorella thermoacetica ATCC 39073]  ali follow..  12  5...........................FGYLFLDRPPY---------------QVLASSAITYEEMLRLHAIEGLLKYYGNSHLADHAFAYLAATAFDGSY----------AIYEALAAWWEARGLLRRGHSQRDLFNHLASFAIHLARGI 104
4 -3.310PB076697 gi|160881556|ref|YP_001560524.1| hypothetical protein Cphy_3432 [Clostridium phytofermentans ISDg]gi|160430222|gb|ABX43785.1| conserved hypothetical protein [Clostridium phytofermentans ISDg]  ali follow..  129YPDIGVRIAHKNFTVLDKYLKSVGTKLL---YVQAPYKVNRDNNQLPYGLKDYPNKNADKL------LEGLNKLKIDYID----FREVFANNFLDYPSLFFNTDHH--------------------------WTTAYQYMLDYM....... 238
5 -3.280PB162020 _JGI.0344610_ 2004040329 [Human Gut Community Subject 8]  ali follow..  6...............................FKVQAEQQRLEAVTAQVADVEQSLEKTKAAAEKQKKKLEALQKETKAARATALTVQDIEAMGKKATNITLTPDECRTL.......................................... 86
6 -3.040HGC01024 gi|162869036|dbj|BABB01000971.1|4.0 TMP01399;  ali follow..  12  41....DYHLSISMGNNLSYSDNYQKEAYKNYVFEKHHITEAEFDSSMV-------------YTRHTEELASLYKKLGERFRSEKKHMQELLALRENKPAVSLPGDTVDVWYDRKLYWLTD................................ 143
7 -2.640PB019278 gi|154508461|ref|ZP_02044103.1| hypothetical protein ACTODO_00960 [Actinomyces odontolyticus ATCC 17982]gi|153798095|gb|EDN80515.1| hypothetical protein ACTODO_00960 [Actinomyces odontolyticus ATCC 17982]  ali follow..  14  6.........................NFLDAMFAPYPASTRLTDAKVELRAMMEDAYA--DAIASGMTHNEAVGRVITDFGNLQEIAPVL.............................................................. 67
8 -2.540PB007740 Q89YT2_BACTN/1-193 PB007740; Pfam-B_7740;  ali follow..  40MMQMQTNQMVRALMLDDATAAK----FTPIYEKYLKELRECRMMNFKPRARKDAAQGTEANTAKETPK--------PVMTDAEIAKMLKDQFAQSRKMLDIREKYYNEFSKILIYQQEKSNMNKFRKEFDR.................... 165
9 -2.250PB000119 Q6KIT1_MYCMO/1-381 PB000119; Pfam-B_119;  ali follow..  13  170LNKNLPNLWGEKFTFTFKEIKFKKINFFSSIFNPNPNPNEIFNFDLNNLPIENGLLTVEAIWFLQSKMELTDTATVIIINNTAYVN--INKNSVKHNNFAVN-RDFPLLGLFVEKFFKDDV-EVFSPKIPALYFVVNNSTKNIFSS..... 357
10 -2.190PB044572 Q8A533_BACTN/1-343 PB044572; Pfam-B_44572;  ali follow..  12  193........IDSVYPLFLCLLMAFSATVYESMQVFVPDTWEHFYFNP----TLSPFKVPFILSVFLLSIWLFLIVALAVLDDLFRQLTPAAAV........................................................... 272

FFAS is supported by the NIH grant R01-GM087218-01
1 4 1 5 6 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Sequence clustering strategies improve remote homology recognitions while reducing search times. Protein Eng. 2002 Aug;15(8):643-9.