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Query: sp|O14791|APOL1_HUMAN(removed signalp:1-27) Apolipoprotein L1 OS=Homo sapiens GN=APOL1 PE=1 SV=5, from H.sapiens

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst EEAGARVQQNVPSGTDTGDPQSKPLGDWAAGTMDPESSIFIEDAIKYFKEKVSTQNLLLLLTDNEAWNGFVAAAELPRNEADELRKALDNLARQMIMKDKNWHDKGQQYRNWFLKEFPRLKSELEDNIRRLRALADGVQKVHKGTTIANVVSGSLSISSGILTLVGMGLAPFTEGGSLVLLEPGMELGITAALTGITSSTMDYGKKWWTQAQAHDLVIKSLDKLKEVREFLGENISNFLSLAGNTYQLTRGIGKDIRALRRARANLQSVPHASASRPRVTEPISAESGEQVERVNEPSILEMSRGVKLTDVAPVSFFLVLDVVYLVYESKHLHEGAKSETAEELKKVAQELEEKLNILNNNYKILQADQELLast
1 -5.360sp|Q86WI1|PKHL1_HUMAN Fibrocystin-L OS=Homo sapiens GN=PKHD1L1 PE=2 SV=2  ali   15  105............................................................................................................................QPSVKATDSDGNCVSVGITALTLRAILKDSNNNQVNGLS--GNTTIPFSSCWALTPLRTGKNYKIEFILDNVVGVESR......................................................................................................................................................................... 184
2 -5.300sp|P08F94|PKHD1_HUMAN Fibrocystin OS=Homo sapiens GN=PKHD1 PE=1 SV=1  ali   15  106...............................................................................................................................LVFLDEQNRRVESLGPPSEPWTISASLEGASDSVLK--GCTQAETQDGYVLAVLISGSNWHFIFTVTSPPGVNFTARSKP.................................................................................................................................................................... 187
3 -5.110tr|F5H5G4|F5H5G4_HUMAN Uncharacterized protein OS=Homo sapiens GN=WBP11 PE=4 SV=1  ali   21  1..........................................................................................................................................................................................................................................................................................................................................RLYEKENPDIYKELRKLEVEYEQKRAQLSQYFDAVKPSEVM 41
4 -4.700sp|Q96LR9|APLD1_HUMAN Apolipoprotein L domain-containing protein 1 OS=Homo sapiens GN=APOLD1 PE=2 SV=2  ali   15  2......................................................................................................................................................................................................................................................................................................................................RRAEGDTKVSQAVLKAKIQKLAESLESCTGALDELSEQLESRVQL 46
5 -4.240sp|Q99743|NPAS2_HUMAN Neuronal PAS domain-containing protein 2 OS=Homo sapiens GN=NPAS2 PE=2 SV=3  ali   10  57..........................................................................................................................................................................................................................................................................................................................................SMFQTIKDQLEQRTRILQANIRWQQEELHKIQEQLCLVQD. 96
6 -4.120tr|D6RB65|D6RB65_HUMAN Uncharacterized protein OS=Homo sapiens GN=NUP54 PE=4 SV=1  ali   17  9...............................................................................................................................................SGTSGTAAATAAPAGFGGLETANSTASGFNFGGFGLTANPAVNFNIGNFGVSTTSA............................................................................................................................................................................ 64
7 -4.120tr|F5H721|F5H721_HUMAN Uncharacterized protein OS=Homo sapiens GN=WBP11 PE=4 SV=1  ali   24  1..........................................................................................................................................................................................................................................................................................................................................RLYEKENPDIYKELRKLEVEYEQKRAQLSQYFDAVKNAQHV 41
8 -4.120sp|Q9Y2W2|WBP11_HUMAN WW domain-binding protein 11 OS=Homo sapiens GN=WBP11 PE=1 SV=1  ali   24  1..........................................................................................................................................................................................................................................................................................................................................RLYEKENPDIYKELRKLEVEYEQKRAQLSQYFDAVKNAQHV 41
9 -4.110sp|Q5T1A1|DCST2_HUMAN DC-STAMP domain-containing protein 2 OS=Homo sapiens GN=DCST2 PE=2 SV=2  ali   11  7...................................................................................................................................................................TVLLLLPQAFSGRTLLLVAA-FGLVLQGPCANTLRNFTRASEAELALNQTAEVLQRAKQPLVSALNKIKAIARKTKEVADRVRKFFRSIMDGVKHI................................................................................................................ 108
10 -3.990sp|Q8TD57|DYH3_HUMAN Dynein heavy chain 3, axonemal OS=Homo sapiens GN=DNAH3 PE=2 SV=1  ali   8  344........................................................................TVNAEEKLVSDFLIQTFKVFQKNQVGPCKYLNVYKKYVDLLDNTAEQNIAAFLKENHDIDDFVTKINAIKKRRNEIASMNITVPL----------------------------------AMFCLDATALNHDLCERAQNLKDHLIQFQVDVNRDTNTSICNQYSHIADKVSEVPANTKELVSLIEFLKKSS----------------------------AVTVFKLRRQLRDASERLEFLMDYADLPYQIEDIFDNSRNLLLHKRDQAEMDLIKRCSEFELRLEGYH............ 568
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 9 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Jaroszewski L, Li W, Godzik A. A segment alignment approach to protein comparison. Bioinformatics. 2003 Apr 12;19(6):742-9.