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Query: sp|P02100|HBE_HUMAN Hemoglobin subunit epsilon OS=Homo sapiens GN=HBE1 PE=1 SV=2, from H.sapiens

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .
# Score Template Links and tools%idFirst MVHFTAEEKAAVTSLWSKMNVEEAGGEALGRLLVVYPWTQRFFDSFGNLSSPSAILGNPKVKAHGKKVLTSFGDAIKNMDNLKPAFAKLSELHCDKLHVDPENFKLLGNVMVIILATHFGKEFTPEVQAAWQKLVSAVAIALAHKYHLast
1 -7.540sp|Q5T2E6|CJ076_HUMAN UPF0668 protein C10orf76 OS=Homo sapiens GN=C10orf76 PE=2 SV=1  ali   1........VLMYDEIFMTEDPSKCSPRFWEELFLMKVNLEYLEGKLESLDGEELMKIKDNINCLFQHCIQALGEVVNALQTLCALIRGVHQKNKSTSGFD-DKAELCMKNLMESLDSLLCAEGSESLKSLCLKLLLCLVTVTDNISQ 151
2 -6.100tr|Q5T2E7|Q5T2E7_HUMAN Novel protein OS=Homo sapiens GN=RP11-190J1.9 PE=2 SV=1  ali   1........VLMYDEIFMTEDPSKCSPRFWEELFLMKVNLEYLEGKLESLDGEELMKIKDNINCLFQHCIQALGEVVNALQTLCALIRGVHQKNKSTSGFD-DKAELCMKVRHKLQMCLWMAASDSCSWTLSADKCTQRFGL...... 145
3 -5.600sp|Q99666|RGPD5_HUMAN RANBP2-like and GRIP domain-containing protein 5/6 OS=Homo sapiens GN=RGPD5 PE=1 SV=3  ali   15LLSLSRGKQDFLKEVVETFANKIGQSALYDALFSSQSPKDTSFLGSDDIGKIDQEPELEDLARYDVGAIRAHNGSLQHL.................................................................... 94
4 -5.600sp|O14715|RGPD8_HUMAN RANBP2-like and GRIP domain-containing protein 8 OS=Homo sapiens GN=RGPD8 PE=1 SV=2  ali   15LLSLSRGKQDFLKEVVETFANKIGQSALYDALFSSQSPKDTSFLGSDDIGKIDQEPELEDLARYDVGAIRAHNGSLQHL.................................................................... 94
5 -5.440sp|Q8IX01|SUGP2_HUMAN SURP and G-patch domain-containing protein 2 OS=Homo sapiens GN=SUGP2 PE=1 SV=2  ali   76..SLKPEHRDFCFFTIKFLKFDKYIMRLQDRLLKSVTPLLMACNAYELSVKMKTLSNPLDLALALETTNSLCRKSLALLGQTFSLASSF-RQEKILEAVGLQDIAPSPAAFPNFEDSTLGREYIDHLKAWLVSS............. 242
6 -5.410sp|Q5TH69|BIG3_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 3 OS=Homo sapiens GN=ARFGEF3 PE=1 SV=3  ali   12  31....RQHQPPTLDLLFELLRTKTPGPGFGIYAVVLLPVMSVWLRR-SHKDHSYWDMASANFKHAIGLSCELVVEHIQSFSMINTMLKDLFELLVACVAKPTETISRVGCSCIRYVLVTAGPVFTEEM---WRLACCALQDAFSA... 178
7 -5.290sp|Q7Z401|MYCPP_HUMAN C-myc promoter-binding protein OS=Homo sapiens GN=DENND4A PE=1 SV=2  ali   15  3..........LIQMLWDNMKLHQDPGQPLYILWNAHTQKYPMVHLL-----------QKSDNSFNQELLKSMVKSIKM-NDVYGPMSQILETLNKCPHFK-RQRSLYREILFLSLV-ALGDAFDKEYKMAYDRLTPSQVKSTHN... 128
8 -5.210sp|Q9NSG2|CA112_HUMAN Uncharacterized protein C1orf112 OS=Homo sapiens GN=C1orf112 PE=1 SV=1  ali   13  4................PHMNHLTLEQTFFSQVL---PKTVKLFDDMMYELTSQARGLSSQNLEIQTTLRNILQTMVQLLGALTGCVQHICATQES---IILENIQSLPSSVLHIIKSTF--VHCKNSESVYSGCLHLVSDLLQALFK 126
9 -5.100sp|Q9Y2D4|EXC6B_HUMAN Exocyst complex component 6B OS=Homo sapiens GN=EXOC6B PE=1 SV=3  ali   12  30.........................................................RKQRRKQARLVLQPPSNMHETLDGYRKYFNQIVG------------FFVVEDHILHTTQGLVNRA---YIDELWEMALSKTIAALRTHSS 104
10 -5.090sp|Q6UWF9|F180A_HUMAN Protein FAM180A OS=Homo sapiens GN=FAM180A PE=2 SV=1  ali   11  18..............................................................RKASDFRTVCNNVIPK--SIPDIRRLSASLSSHPGILKKEDFERTVLTLAYTAYRT--ALSHGHQKDIWAQSLVSLFQALRH... 95

FFAS is supported by the NIH grant R01-GM087218-01
1 4 0 1 8 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Wooley JC, Godzik A. Probing metagenomics by rapid cluster analysis of very large datasets. PLoS ONE. 2008;3(10):e3375. Epub 2008 Oct 10.