current user: public

If you have questions about the server, please let us know.

Query: sp|P61221|ABCE1_HUMAN ATP-binding cassette sub-family E member 1 OS=Homo sapiens GN=ABCE1 PE=1 SV=1, from H.sapiens

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .  320    .  330    .  340    .  350    .  360    .  370    .  380    .  390    .  400    .  410    .  420    .  430    .  440    .  450    .  460    .  470    .  480    .  490    .  500    .  510    .  520    .  530    .  540    .  550    .  560    .  570    .  580    .  590    .
# Score Template Links and tools%idFirst MADKLTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTPQSKIAWISETLCIGCGICIKKCPFGALSIVNLPSNLEKETTHRYCANAFKLHRLPIPRPGEVLGLVGTNGIGKSTALKILAGKQKPNLGKYDDPPDWQEILTYFRGSELQNYFTKILEDDLKAIIKPQYVDQIPKAAKGTVGSILDRKDETKTQAIVCQQLDLTHLKERNVEDLSGGELQRFACAVVCIQKADIFMFDEPSSYLDVKQRLKAAITIRSLINPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVTMPFSVREGINIFLDGYVPTENLRFRDASLVFKVAETANEEEVKKMCMYKYPGMKKKMGEFELAIVAGEFTDSEIMVMLGENGTGKTTFIRMLAGRLKPDEGGEVPVLNVSYKPQKISPKSTGSVRQLLHEKIRDAYTHPQFVTDVMKPLQIENIIDQEVQTLSGGELQRVALALCLGKPADVYLIDEPSAYLDSEQRLMAARVVKRFILHAKKTAFVVEHDFIMATYLADRVIVFDGVPSKNTVANSPQTLLAGMNKFLSQLEITFRRDPNNYRPRINKLNSIKDVEQKKSGNYFFLDDLast
1 -6.270sp|Q6P2S7|GNN_HUMAN Tetratricopeptide repeat protein GNN OS=Homo sapiens GN=GNN PE=2 SV=3  ali   83.............................................................................................................................................................................................................................................................................................................................................................................KFALKDVELDFNNVAADSSLDSVP.................................................................................................................................................................................................................. 106
2 -4.870tr|E7ETR9|E7ETR9_HUMAN Uncharacterized protein OS=Homo sapiens GN=C20orf132 PE=4 SV=1  ali   12  4....................................................................................................EEV-VIPCAYDSDSESVDLELSNLEIIKKGSSSIELTDLDIPDIPGLHCEPLSHSPRHLQQDPLSEAIVEKLIQSIQKVFNGELKGELEKLKFLGDLSSLSQALPYDETAKSFIHS------HIADIVHTLNV----LVQEERPHSLSSSMRQEVFVTIADLSYQDVHLLLGSEDAELFSLTIKSIITL...................................................................................................................................................................................................................................................................................................................... 183
3 -4.710sp|Q8IVG5|SAM9L_HUMAN Sterile alpha motif domain-containing protein 9-like OS=Homo sapiens GN=SAMD9L PE=1 SV=2  ali   13  49....................................................................................................................................................................................................................................................................................................................................................................................KIINLYHHPGCGGTTLAMHVLWDLKKNFRCAVL--------KNKTTDFAEIAEQVINLVTYRAKSHQDYIPVLLLVDDFEE--QENVYFLQNAIHSVLAEKDLRYEKTLVIILRNPDESAKLADSIALNYQLSS............................................................................................. 177
4 -4.530sp|Q9BYF1|ACE2_HUMAN Angiotensin-converting enzyme 2 OS=Homo sapiens GN=ACE2 PE=1 SV=2  ali   1......................................................................................................................................................................................................................................................................................................................................................................................................................................................EMYLFRSSVAYAMRQYFLKVKNQMILFGEEDVRVANLKPRISFNFFVTAPKNVSDIIPRTEVEKAIRMSRSRINDAFRLNDNSLEFL.......................................................................... 87
5 -4.500sp|Q8IYX3|CC116_HUMAN Coiled-coil domain-containing protein 116 OS=Homo sapiens GN=CCDC116 PE=2 SV=2  ali   10  3....................................................................................................................................................................................................................EASEPRPGEQEPIFRKREFNKEIKSLLLREPHRTLNFLADHRLFPALQSVVSQAVDKL......................................................................................................................................................................................................................................................................................................................................... 73
6 -4.430sp|Q8IWB6|TEX14_HUMAN Testis-expressed protein 14 OS=Homo sapiens GN=TEX14 PE=2 SV=2  ali   11  34..............................................................................................................................................................................................................................................................................................................................................................................................................................................SPNRLLKAGVISAQNIYSFGFGKAMPWFQFYLTGATQMAYLGSLPVIGEKEVIQADEPTFSF........................................................................................................... 96
7 -4.210sp|Q6UXT9|ABH15_HUMAN Abhydrolase domain-containing protein 15 OS=Homo sapiens GN=ABHD15 PE=2 SV=2  ali   13  6........................................................................................................................................................................................................................FSGPHLQTLCHFGPELAREYLQLADDGLVALDWVVGPCVRGRRITSAGGLPAVLLVIPNAW.................................................................................................................................................................................................................................................................................................................................. 72
8 -4.000sp|P55017|S12A3_HUMAN Solute carrier family 12 member 3 OS=Homo sapiens GN=SLC12A3 PE=1 SV=3  ali   6.................................................................................................................................................................................................................................................................................................................................................................................................................................................SDEEITKNRVKSLRQVRLNEIVLDY------------------SRDAALIVITLPIGRKGKCPSSLYMAWLETLSQDLRPPVILIRGNQENVLTFYCQ.................................................................... 85
9 -3.990sp|Q8IV32|CCD71_HUMAN Coiled-coil domain-containing protein 71 OS=Homo sapiens GN=CCDC71 PE=2 SV=3  ali   17  3...........................................................................................................................................................................................................VVVQHVEEKAVHSWS-----RISTAGKKALEEALLVF-NPMSQDLSATEAQLVAFLQGLRDDGQPTILRSGDV................................................................................................................................................................................................................................................................................................................................... 70
10 -3.980sp|P51948|MAT1_HUMAN CDK-activating kinase assembly factor MAT1 OS=Homo sapiens GN=MNAT1 PE=1 SV=1  ali   27  10...................................................................................................................................................................................................ELEMLGRLGYLNHVRAASPQDLAGGYTSSLACHRAL-QDAFSGLFWQPS................................................................................................................................................................................................................................................................................................................................................................... 57

FFAS is supported by the NIH grant R01-GM087218-01
1 3 9 5 6 0   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Comparative analysis of protein domain organization. Genome Res. 2004 Mar;14(3):343-53.