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Query: sp|Q29940|1B59_HUMAN(removed signalp:1-24) HLA class I histocompatibility antigen, B-59 alpha chain OS=Homo sapiens GN=HLA-B PE=2 SV=1, from H.sapiens

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIFKTNTQTYRENLRIALRYYNQSEAGSHTWQTMYGCDLGPDGRLLRGHNQLAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGTCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGKGGSYSQAASSDSAQGSDVSLTALast
1 -11.800sp|Q8IZF5|GP113_HUMAN Probable G-protein coupled receptor 113 OS=Homo sapiens GN=GPR113 PE=2 SV=1  ali   8  1......................................................................................................................................................................................AVPGILNLNSQLPGDTLSLTLHLSQ---EATNLSWFLRHPGSPSPILGTQVSVTSSHGQAALSVSNMSHHWAGEYMSCFEAQGFKWNLYEVVRVPLKATD........................................................ 102
2 -6.790sp|Q8N2E2|VWDE_HUMAN von Willebrand factor D and EGF domain-containing protein OS=Homo sapiens GN=VWDE PE=2 SV=4  ali   10  2.............................................................................................................................................................................................VLVELIESRLFCRCSFDVPATKNFHIAWSRLSSQEVKEELTQE---TTVQAFSLLELDGINLRLGDRIFCSAS............................................................................ 74
3 -6.500sp|O00341|EAA5_HUMAN Excitatory amino acid transporter 5 OS=Homo sapiens GN=SLC1A7 PE=2 SV=2  ali   12  8................................................................................................................................................................................................RDTGTEKLLPCETK---PVSLQVAAQQNG-KSVAEASELTLGPTCPHHVPVQVEQDEELPAASLNHCTIQISELETNV.................................................................... 85
4 -6.250sp|Q96NL8|CH037_HUMAN Uncharacterized protein C8orf37 OS=Homo sapiens GN=C8orf37 PE=2 SV=1  ali   14  10............................................................................................................................................................................................IGTNISWRACDHLRCIACDFLVVSYDYMWDKSCDYL--------FFRNNMPEFHKLKAKLIKKKGTRAYACQCSWRTIEEVTDLQTDHQ............................................................. 91
5 -6.250sp|Q9HBV2|SACA1_HUMAN Sperm acrosome membrane-associated protein 1 OS=Homo sapiens GN=SPACA1 PE=1 SV=1  ali   8  68.................................................................................................................................................................................................ESLESVRLACIHT---LNRFKYMWK-----LLRQDQQSIILVNDSAILEV-----RKESHPLAFECDTLDNN......................................................................... 128
6 -5.870sp|Q12836|ZP4_HUMAN Zona pellucida sperm-binding protein 4 OS=Homo sapiens GN=ZP4 PE=2 SV=1  ali   10  3..............................................................................................................................................................................................KPEAPDYSSVLHCGPWSFQ--AVNLNQEATSPPVLIAWDNQGLLHELQNDSDCGTWIRKGPGSSVVLECYVTEWDSHYIMPVGVEGAGAA.......................................................... 96
7 -5.530sp|Q9HCJ5|ZSWM6_HUMAN Zinc finger SWIM domain-containing protein 6 OS=Homo sapiens GN=ZSWIM6 PE=2 SV=2  ali   3  1...................................................................................................................................................................................................DETRLPFRRGIALLESGCVDNVLQVGFHLSGTVTEPAIQSEPETVCNVAISFDRCKITSVTCSCGNKDIFYCAHVVA.................................................................. 77
8 -5.390sp|Q9P217|ZSWM5_HUMAN Zinc finger SWIM domain-containing protein 5 OS=Homo sapiens GN=ZSWIM5 PE=2 SV=2  ali   13  6..............................................................................................................................................................................................................GLLDSGSVENVLQVGFHLSGTVTELATASEPAVTYK--VAISFDRCKITSVTCGCAHV----ALSLYRIRKPDQVKLRLPI................................................... 91
9 -5.390sp|Q9HC57|WFDC1_HUMAN WAP four-disulfide core domain protein 1 OS=Homo sapiens GN=WFDC1 PE=2 SV=2  ali   19  1.................................................................................................................................................................................................................PPPV-LDWLVQPKPRWLG--NGWLLDGPEEVLQAEACSTTEDGAESGYECHILSPG......................................................................... 59
10 -5.130sp|Q3B7T3|BEAN1_HUMAN Protein BEAN1 OS=Homo sapiens GN=BEAN1 PE=2 SV=2  ali   16  10..................................................................................................................................................................................................SSRRMRYACSSSEDWPPPLDI----SSDGDVDATVLRELYPDSPPGYEECVQLYVPTDAPPPYSC............................................................................... 79
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 2 8 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Zmasek CM, Zhang Q, Ye Y, Godzik A. Surprising complexity of the ancestral apoptosis network. Genome Biol. 2007 Oct 24;8(10):R226 [Epub ahead of print]