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Query: sp|Q8WXG1|RSAD2_HUMAN(removed signalp:1-15) Radical S-adenosyl methionine domain-containing protein 2 OS=Homo sapiens GN=RSAD2 PE=1 SV=1, from H.sapiens

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst VFRQPLSSLWRSLVPLFCWLRATFWLLATKRRKQQLVLRGPDETKEEEEDPPLPTTPTSVNYHFTRQCNYKCGFCFHTAKTSFVLPLEEAKRGLLLLKEAGMEKINFSGGEPFLQDRGEYLGKLVRFCKVELRLPSVSIVSNGSLIRERWFQNYGEYLDILAISCDSFDEEVNVLIGRGQGKKNHVENLQKLRRWCRDYRVAFKINSVINRFNVEEDMTEQIKALNPVRWKVFQCLLIEGENCGEDALREAERFVIGDEEFERFLERHKEVSCLVPESNQKMKDSYLILDEYMRFLNCRKGRKDPSKSILDVGVEEAIKFSGFDEKMFLKRGGKYIWSKADLKLDWLast
1 -19.400sp|Q8WXG1|RSAD2_HUMAN Radical S-adenosyl methionine domain-containing protein 2 OS=Homo sapiens GN=RSAD2 PE=1 SV=1  ali   100  1..............................................................................................................................................................................................................................................................................VSCLVPESNQKMKDSYLILDEYMRFLNCRKGRKDPSKSILDVGVEEAIKFSGFDEKMFLKRGGKYIWSKADLKLDW 76
2 -5.030sp|Q96JH7|VCIP1_HUMAN Deubiquitinating protein VCIP135 OS=Homo sapiens GN=VCPIP1 PE=1 SV=2  ali   10  15.........................................................ARLFFPASGSVSIECTECGQRHEQQQLLGVEEVTDPDVVLHNLNTELVKVMGLSNYHCKLLSPILARYGMDKQTGRAKLLRDMNQGELFDCALLGDRAFLIEPEHVNTVGY.................................................................................................................................................................................. 139
3 -4.590sp|Q96GL9|F163A_HUMAN Protein FAM163A OS=Homo sapiens GN=FAM163A PE=2 SV=1  ali   17  38................................................................CGVAASHCTTCSPYSSPFYIRTADMVPN---------------GGGERLSFAPTYY---------KEGGPPSLKLAAPQSYPVTWPGSGREAFTNPRAISTD.................................................................................................................................................................................... 116
4 -4.440sp|Q5TIA1|MEI1_HUMAN Meiosis inhibitor protein 1 OS=Homo sapiens GN=MEI1 PE=2 SV=2  ali   11  24.......................................................................CLACALELLPDPGVSLVRKKHMLSCFQDA-FGLLCSMEDGSVTDLCIEVLIQITTQLKLEQTIRCLLDECHKELCNMPSMRGSLATLTLLGKLVDAIPALADELVMEHGNLMEHLLRGLVYPSEGIQASVCYLYGKLYSSPVAAEMLSGHFRE.......................................................................................................................... 201
5 -4.140sp|Q9UGT4|SUSD2_HUMAN Sushi domain-containing protein 2 OS=Homo sapiens GN=SUSD2 PE=1 SV=1  ali   11  1.....................................................................VICRFKDSIQTLGHVDSSGQVHCVSPLLYESGRIPFTVSNGHSFPRAGTWLAVH--QYYGTANTSGNLSLTWHVKSLPT----------QTITIELWGYEETGMPYSQEWTAKWSYLYPLATHIPNSGSFTFTLRIIDSKNYAGQKD.................................................................................................................................. 170
6 -4.130sp|Q9NY47|CA2D2_HUMAN Voltage-dependent calcium channel subunit alpha-2/delta-2 OS=Homo sapiens GN=CACNA2D2 PE=1 SV=1  ali   1...................................................................CEMDCE-CVLIDDGGFLVLSNQNHQWDQVGRFFSEVDANLM--LALYNNSFYTRKESYDYQAACAPQPPGNLGAAPRGVFVPTVADFLNLAWWTSAAA..................................................................................................................................................................................... 102
7 -4.010sp|P78312|F193A_HUMAN Protein FAM193A OS=Homo sapiens GN=FAM193A PE=1 SV=2  ali   10  1..................................................................TC--ECHVCKQEASGLTPSAMTAGQFLSPEKPTHPALHLHIHGPRPLIHPTLYAT................................................................................................................................................................................................................................. 71
8 -3.870sp|Q8NI27|THOC2_HUMAN THO complex subunit 2 OS=Homo sapiens GN=THOC2 PE=1 SV=2  ali   13  18........................................................................QYVANQLKAGKSFDLLILKEVVQKMAEMTMEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHD-LLMAQQRNGVIEKHLKLVGKLYDQCHDQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAH.................................................................................................................................. 180
9 -3.870sp|O75592|MYCB2_HUMAN Probable E3 ubiquitin-protein ligase MYCBP2 OS=Homo sapiens GN=MYCBP2 PE=1 SV=3  ali   22  112..............................................................YAKIACSHPCGHCGGVKNEEHCLPCLH................................................................................................................................................................................................................................................................. 141
10 -3.850sp|Q86V15|CASZ1_HUMAN Zinc finger protein castor homolog 1 OS=Homo sapiens GN=CASZ1 PE=2 SV=4  ali   15  20............................................................RFGTKDFCDGQCDHCVVEECGALFSTLDGAIK.............................................................................................................................................................................................................................................................. 58

FFAS is supported by the NIH grant R01-GM087218-01
1 3 7 7 9 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Sikora S, Godzik A. Combination of multiple alignment analysis and surface mapping paves a way for a detailed pathway reconstruction--the case of VHL (von Hippel-Lindau) protein and angiogenesis regulatory pathway. Protein Sci. 2004 Mar;13(3):786-96. Epub 2004 Feb 06.