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Query: sp|Q15758|AAAT_HUMAN Neutral amino acid transporter B(0) OS=Homo sapiens GN=SLC1A5 PE=1 SV=2, from H.sapiens

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MVADPPRDSKGLAAAEPTANGGLALASIEDQGAAAGGYCGSRDQVRRCLRANLLVLLTVVAVVAGVALGLGVSGAGGALALGPERLSAFVFPGELLLRLLRMIILPLVVCSLIGGAASLDPGALGRLGAWALLFFLVTTLLASALGVGLALALQPGAASAAINASVGAAGSAENAPSKEVLDSFLDLARNIFPSNLVSAAFRSYSTTYEERNITGTRVKVPVGQEVEGMNILGLVVFAIVFGVALRKLGPEGELLIRFFNSFNEATMVLVSWIMWYAPVGIMFLVAGKIVEMEDVGLLFARLGKYILCCLLGHAIHGLLVLPLIYFLFTRKNPYRFLWGIVTPLATAFGTSSSSATLPLMMKCVEENNGVAKHISRFILPIGATVNMDGAALFQCVAAVFIAQLSQQSLDFVKIITILVTATASSVGAAGIPAGGVLTLAIILEAVNLPVDHISLILAVDWLVDRSCTVLNVEGDALGAGLLQNYVDRTESRSTEPELIQVKSELPLDPLPVPTEEGNPLLKHYRGPAGDATVASEKESVMLast
1 -125.0006gct_A mol:protein length:541 Neutral amino acid transporter B(0)  ali model follow..  100  1MVADPPRDSKGLAAAEPTANGGLALASIEDQGAAAGGYCGSRDQVRRCLRANLLVLLTVVAVVAGVALGLGVSGAGGALALGPERLSAFVFPGELLLRLLRMIILPLVVCSLIGGAASLDPGALGRLGAWALLFFLVTTLLASALGVGLALALQPGAASAAINASVGAAGSAENAPSKEVLDSFLDLARNIFPSNLVSAAFRSYSTTYEERNITGTRVKVPVGQEVEGMNILGLVVFAIVFGVALRKLGPEGELLIRFFNSFNEATMVLVSWIMWYAPVGIMFLVAGKIVEMEDVGLLFARLGKYILCCLLGHAIHGLLVLPLIYFLFTRKNPYRFLWGIVTPLATAFGTSSSSATLPLMMKCVEENNGVAKHISRFILPIGATVNMDGAALFQCVAAVFIAQLSQQSLDFVKIITILVTATASSVGAAGIPAGGVLTLAIILEAVNLPVDHISLILAVDWLVDRSCTVLNVEGDALGAGLLQNYVDRTESRSTEPELIQVKSELPLDPLPVPTEEGNPLLKHYRGPAGDATVASEKESVM 541
2 -113.0005llm_A mol:protein length:522 Excitatory amino acid transporter 1,Neutral amino acid transporter B(0),Excitatory amino acid transporter 1  ali model follow..  60  37........................................TKEDVKSFLRRNALLLLTVLAVILGVVLGFLLRPY----PLSPREVKYFAFPGELLMRMLKMLILPLIVSSLITGLASLDAKASGRLGMRAVVYYMSTTIIAVVLGIILVLIIHPGAASAAITASVGAAGSAENAPSKEVLDCFLDLARNIFPSNLVSAAFRSYSTTYEERTITGTRVKVPVGQEVEGMNILGLVVFSMVFGFALGKMGEQGQLLVDFFNSLNEATMKLVAIIMWYAPLGILFLIAGKIVEMEDLEVLGGQLGMYMVTVIVGLVIHGLIVLPLIYFLITRKNPFVFIAGILQALITALGTSSSSATLPITFKCLEENNGVDKRITRFVLPVGATINMDGTALYEAVAAIFIAQVNNYELDFGQIITISITATAASIGAAGIPQAGLVTMVIVLTAVGLPTDDITLIIAVDWLLDRFRTMVNVLGDALGAGIVEHLSRKELEKQDAELGNSVIEENEMKKPYQLIAQDNETEKPIDSETK............ 521
3 -89.2005dwy_A mol:protein length:438 Proton/glutamate symporter, SDF family  ali model follow..  27  2.........................................GKSLLRRYLDYPVLWKILWGLVLGAVFGLIAGHF----GYAGAVKTYIKPFGDLFVRLLKMLVMPIVLASLVVGAASISPARLGRVGVKIVVYYLATSAMAVFFGLIVGRLFNVGANVNLGSGT--------GKAIEAQPPSLVQTLLNIVPTNPFAS--------------------------LAKGEVLPVIFFAIILGIAITYLRKSAETLLRVFDGLAEAMYLIVGGVMQYAPIGVFALIAYVMAEQGV--RVVGPLAKVVGAVYTGLFLQIVITYFILLK-VFGIDPIKFIRKAKDAMITAFVTRSSSGTLPVTMRVAEEEMGVDKGIFSFTLPLGATINMDGTALYQGVTVLFVANAIGHPLTLGQQLVVVLTAVLASIGTAGVPGAGAIMLAMVLQSVGLDLTAYAMILGIDAILDMGRTMVNVTGDLAGTVIVAKTEKELDESKWIS............................................. 430
4 -87.5001xfh_A mol:protein length:422 proton glutamate symport protein  ali model follow..  29  2...........................................GLYRKYIEYPVLQKILIGLILGAIVGLILGHY----GYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLA--------VGGQQFQPHQAPPLVHILLDIVPTNPFGA--------------------------LANGQVLPTIFFAIILGIAITKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGV--HVVGELAKVTAAVYVGLTLQILLVYFVLLK-IYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVA-KEMGISEGIYSFTLPLGATINMDGTALYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPLAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTEGTLVPR................................................. 422
5 -87.3003kbc_A mol:protein length:425 425aa long hypothetical proton glutamate symport protein  ali model follow..  29  2...........................................GLYRKYIEYPVLQKILIGLILGAIVGLILGHY----GYAHAVHTYVKPFGDLFVRLLCMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLA--------VGGQQFQPHQAPPLVHILLDIVPTNPFGA--------------------------LANGQVLPTIFFAIILGIAITYLRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGV--HVVGELAKVTAAVYVGLTLQILLVYFVLLK-IYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVA-KEMGISEGIYSFTLPLGATINMDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLCMVLHSVGLPLAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTEGELEKGV................................................ 423
6 -87.2005cfy_A mol:protein length:425 425aa long hypothetical proton glutamate symport protein  ali model follow..  29  2...........................................GLYRKYIEYPVLQKILIGLILGAIVGLILGHY----GYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGG--------QQFQPKQAPPLVHILLDIVPTNPFGA--------------------------LANGQVLPTIFFAIILGIAITYLRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQG--VHVVGELAKVTAAVYVGLTLQILLVYFVLLK-IYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVA-KEMGISEGIYSFTLPLGATINMDGTALYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPLAAYAMILGIDAILDMGATMVNVTGDLTGTAIVAKTEGELEKGV................................................ 423
7 -86.7006bat_A mol:protein length:420 Glutamate transporter homolog  ali model follow..  29  2...........................................GLYRKYIEYPVLQKILIGLILGAIVGLILGHY----GYADAVKTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGG--------QQFQPKQAPPLVKILLDIVPTNPFGA--------------------------LANGQVLPTIFFAIILGIAITYLRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGV--KVVGELAKVTAAVYVGLTLQILLVYFVLLK-IYGIDPISFIKKAKDAMLTAFVTRSSSGTLPVTMRVA-KEMGISEGIYSFTLPLGATINMDGTALYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLESVGLPLAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTEGTL.................................................... 419
8 -7.5205y26_A mol:protein length:241 DNA polymerase epsilon subunit D  ali model follow..  12  1...................................................................................................................................................................................................................................................................................................................................................MGNQDKSKETSELDDLALPRSI----------MRLVKGVLPEKSLVQKEALKAMINSATLFVSFL-----------------TSASGEIATNNNRKILMPQDVLNALD---------IEYPEFSKTLKKHLEAYELALKEKRLKLPNVSDVDNRKKAKIDAHDTTPLDEEKDELEEERIAEDIAQNEVEQNIDDVEDLEE.. 166
9 -6.7101jbi_A mol:protein length:100 cochlin  ali model follow..  13  1...................................................................................................................................................................................................................................................................................................................................................................TAPIAITCFTRGLDIRKEKADVLCPGGCP-SVYGNIVYASVSSICGAAVHGVISNSGGPVRVYSLPGRENY--SSVDANGI-------QSQMLSRWSASFTVTLE................................................................................. 100
10 -6.2801kpl_A mol:protein length:473 putative ClC family, chlorine transport protein  ali model follow..  13  36.........................................................LFMAAVVGTLTGLVGVAFEKAVSWVQNMAFILSALLAMVGYFLVRKFAPEAGGSGIPEIEGALEELRPVRWWRVLPVKFIGGMGTLGAGMVLG---REG------------------------------------PTVQIGGNLGRM---------------LDVFRMRSAEARHTLLATGAAAGLSAA-----NAPLAGILFIIEEMRPQFRYNLISIKAVFTGVIMSSIVFRIFNGEAPIIEVGKLILGIIFGVVGPVFNLVLRTQDMFQRFHGGEIKKWVLMGGAIGGLCGILGLIEPAAAIAAAGNFSVGLLLFIFITRVVTTLLCFSSGAPGGI-MLALGTLLG---AFGMAAAVLFPQYHLEAGTFAIAGMG----ALMAASVRAPLTGIVLVL----MTDNYQLILPMIITCLGATLLAQFLGG..................................................... 441

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Damiano JS, Stehlik C, Pio F, Godzik A., Reed JC. CLAN, a novel human CED-4-like gene. Genomics. 2001 Jul;75(1-3):77-83.