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current user: public |
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Query: sp|Q8WWM9|CYGB_HUMAN Cytoglobin OS=Homo sapiens GN=CYGB PE=1 SV=1, from H.sapiens |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 | |||||||
# | Score | Template | Links and tools | %id | First | MEKVPGEMEIERRERSEELSEAERKAVQAMWARLYANCEDVGVAILVRFFVNFPSAKQYFSQFKHMEDPLEMERSPQLRKHACRVMGALNTVVENLHDPDKVSSVLALVGKAHALKHKVEPVYFKILSGVILEVVAEEFASDFPPETQRAWAKLRGLIYSHVTAAYKEVGWVQQVPNATTPPATLPSSGP | Last |
1 | -36.300 | PF00042.22; GLB8_CHITH/9-115; Globin | ali follow.. | 17 | 1 | ......................QLALFKSSWNTVKHN----EVDILYAVFKANPDIQAKFPQFAGKDL-DSIKDSADFAVHSGRIVGFFSEVIGLIGNPENLKTLIDGLASSHK-ARGIEKAQFEEFRASLV.......................................................... | 107 |
2 | -13.700 | PF11563.8; F0XJU9_GROCL/20-199; Protoglobin | ali follow.. | 13 | 2 | ......DARIQYLHSFLDFSSTDIDHLVAGAKYIKVLIPAVTNIVYRKLLQ-YDITARAFETRSTSFEGPLDAVPAEDSPQILHRKMFLRAYLARLCS-MTFWEYLDKVGMMHVGPLHVEYIHIGATLSLIQDVLTEAVLSHPRLSMGRALGKVIWIQNDLFAKWYVRDGEE.................. | 180 |
3 | -7.410 | PF00502.19; APCD_SYNP2/6-160; Phycobilisome protein | ali follow.. | 8 | 13 | ..................PSSGELSGIKRIAEALADNEKKIVDQAQKQLFSIHPEYRTSGGNAATTKQYNQCLRDYGW------YLRLVTYGI--AGDKDPIERIGLIGVKEMYNALGVPVPGMVDAIRCLKDAALGVLDSEEARIAAPYFDFITQAM................................ | 155 |
4 | -7.100 | PF11075.8; Q089B5_SHEFN/10-184; Protein of unknown function VcgC/VcgE (DUF2780 topsan) | ali follow.. | 8 | 53 | .........VGDVMSQLGLSQTQAE--GGLGSLLSLAQTNLGENDFSQLSDSIPNADGLLAAVPALSSDSG----------MSGLLSQAGNLGSALQGSAMVYDAFEKLG--------ISKEYITPMVDIAKNYLQQSGGDGTVDLLMKG........................................ | 173 |
5 | -6.870 | PF08897.11; D5WYH9_THIK1/5-137; Domain of unknown function (DUF1841 topsan) | ali follow.. | 12 | 2 | ...................KDEVRQFFLSAWQRHRAGGVLTPLEIAADWMELHPEYHAELTDPQSANRDYAVEQGRTNPFLHLSMHLTIAEQVSI-DQPPGIRQAFELLRSKRG-----EHEAHHAIMECLGEMLWTAQRSGLPPD-GAAYVDCVQ.................................. | 132 |
6 | -6.580 | PF08064.13; ATR_CANGA/887-989; UME (NUC010) domain | ali follow.. | 7 | 2 | .............................................................................LQDNILGIFQVFSSDMHDVEGKTTYYEKLRVINGISFLVKHASNKCIISALAQLSICLQSGLEPEVRYLSMRCWFLLIQRL................................ | 83 |
7 | -5.890 | PF14393.6; D7GQA1_9FIRM/13-237; Domain of unknown function (DUF4422 topsan) | ali follow.. | 10 | 27 | GKDSIGYQGDSTGDNISNLNPYFCELTGMYWMWKNLQADYLGLAHYRRHFCFRKKKAENDEESKWKSVLNSKEAQILCKQYDVIVPEKRHYVIETLEHLEKTREIIGERYPQYFDSYDMRADLVDKYCSFLFDVLFELDKRVDTSNYSAFQARYPGRVGEILLN.......................... | 215 |
8 | -5.770 | PF01603.20; A0A1I7VZ75_LOALO/113-523; Protein phosphatase 2A regulatory B subunit (B56 family) | ali follow.. | 5 | 239 | ........................PQLAYCVVQFLEKDPTLTEPVILSLLKFWPHSPKEVMFLNEFEEILDVIEPAEFQKVMVPLFQQLARCVSS-PHFQVAERALYYWNNEYIMSL---SDNAVVILPIMFPALYRNSKNHWNKTIHGLIYNALKLFMEINQRLFDECSQNFNREREDESAKLKAKVS. | 402 |
9 | -5.700 | PF06576.11; A0A028A9Z3_ECOLX/1-176; Protein of unknown function (DUF1133 topsan) | ali follow.. | 10 | 6 | ........ITGKSGEHLRLNTLEAVWIQRMWGRWSYIGGGKSGNMFNRLLVSKKLTKTAVNEVLRSMKKSGLEKPELEAFFRDMTRQKSWLSHCTDTEALIIDRVISEVLGEYPGLINILRQRYRKMAECLNRTHPEWCFSTCEKRIAGWLAVAEHMLYVPMHDSFR....................... | 176 |
10 | -5.640 | PF06021.11; F7BVP0_HORSE/2-206; Aralkyl acyl-CoA:amino acid N-acyltransferase | ali follow.. | 21 | 168 | ..............RLSSLDVTHAALVNKFWH----GGNERSQRFIERCIRNFPN....................................................................................................................................... | 205 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Plewczynski D, Rychlewski L, Ye Y, Jaroszewski L, Godzik A. Integrated web service for improving alignment quality based on segments comparison. BMC Bioinformatics. 2004 Jul 22;5(1):98. |