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Query: sp|Q8WXG1|RSAD2_HUMAN(removed signalp:1-15) Radical S-adenosyl methionine domain-containing protein 2 OS=Homo sapiens GN=RSAD2 PE=1 SV=1, from H.sapiens

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst VFRQPLSSLWRSLVPLFCWLRATFWLLATKRRKQQLVLRGPDETKEEEEDPPLPTTPTSVNYHFTRQCNYKCGFCFHTAKTSFVLPLEEAKRGLLLLKEAGMEKINFSGGEPFLQDRGEYLGKLVRFCKVELRLPSVSIVSNGSLIRERWFQNYGEYLDILAISCDSFDEEVNVLIGRGQGKKNHVENLQKLRRWCRDYRVAFKINSVINRFNVEEDMTEQIKALNPVRWKVFQCLLIEGENCGEDALREAERFVIGDEEFERFLERHKEVSCLVPESNQKMKDSYLILDEYMRFLNCRKGRKDPSKSILDVGVEEAIKFSGFDEKMFLKRGGKYIWSKADLKLDWLast
1 -54.100d1tv8a_ c.1.28.3 (A:) Molybdenum cofactor biosynthesis protein A MoaA {Staphylococcus aureus [TaxId: 1280]}  ali model 3D-neighbors follow..  15  1..............................................EQIKDKLGRPIRDLRLSVTDRCNFRCDYCMPKEPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLMRRDLDVLIAKLNQID---GIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNI---KATTILEQIDYATSIGLNVKVNVVIQKGINDDQIIPMLEYFKDKH---IEIRFIEFMDVGNDNGWDFSKV-VTKDEMLTMIEQHFEIDPVEPKYFGEVAKYYRHKDNGVQLITSVSQSFCSTCTRARLSSDGKFYGCLFTVDGFNVKAFIRSGVTDEELKE. 301
2 -16.800d1r30a_ c.1.28.1 (A:) Biotin synthase {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  11  1................RPRWTLSQVTELFEKPLLDLLFEAQQVHRQHFDPRQV----STLLSIKTGACPEDCKYCPQSSRYKTLMEVEQVLESARKAKAAGSTRFCMGAAKNPHERDMPYLEQMVQGVKAMGLEACMTL---GTLSESQAQRLANAGLDYYNHNLDTSPEFYGNIITT-----RTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLA........................................................................................................................ 207
3 -16.000d1olta_ c.1.28.2 (A:) Oxygen-independent coproporphyrinogen III oxidase HemN {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  18  43..................................................ARYPERPLSLYVHIP--CHKLCYFCGCNKIVTRQQHEQEIVHRAPLFAGRHVSQLHWGGGTPLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIFTSTNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVFNYA.............................................................................................................. 240
4 -7.460d1x6ma1 b.88.1.4 (A:4-196) Glutathione-dependent formaldehyde-activating enzyme, Gfa {Paracoccus denitrificans [TaxId: 266]}  ali model 3D-neighbors follow..  13  36..........................................................PVRVAVRAQCG--CTKCWKPEGA-----------IFSQVAVVGRDALEVLEGAEKL-----------EIVNAEAPIQRHRCRDCGVHMYGRIENRDHPFYGLDFVHTELSDED............................................................................................................................................................................... 130
5 -7.320d1sqsa_ c.23.5.5 (A:) Hypothetical protein SP1951 {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]}  ali model 3D-neighbors follow..  1...................MNKIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVDISFRTPFNSELEISNSDSEELFKKGIDRQSNA-DDGGVIKKELLESDIIII----SSPVVSVDTKNFIERIGGWSHLFRLAGVTLDVAESNGSDNVSEYLRDIFSYMGGQILHQDIAEAQLMEATYKIEDVLEGKIKYKTTDYQERAYQTLKLILENYDSEHFEKMYWEKKRLFEANSLE................................................................................................................ 225
6 -7.270d4ogca2 d.4.1.8 (A:513-673) CRISPR-associated endonuclease Cas9/Csn1, HNH domain {Actinomyces naeslundii [TaxId: 1115803]}  ali model 3D-neighbors follow..  12  3....................RMADERDKANRRRYNDNQEAMKKIQRDYGKEGYISRGDIVRLDALELQGCACLYC-GTTIGYHTCQLDHIVPQAG-------------PGS---NNRRGNLVAVCERCNRSKS..................................................................................................................................................................................................................... 98
7 -6.740d3l9va_ c.47.1.0 (A:) automated matches {Salmonella enterica [TaxId: 216597]}  ali model 3D-neighbors follow..  10  7......................................................TPPVVDAPAVVEFFSFYCPPCYA---SQTMGVDQAIRHVLPQGSRMVKYHVSLLGPLGHELTRAWALAMVMKETDVIEKAFFTAGMVEKRLHSPD--DVRRVFMSATGISRGEYDRSIKS--------PAVNDMVALQERLFKEYGVRGTPSVYVRVENFRSRYAAVVRKL......................................................................................................................... 179
8 -6.660d1jpdx1 c.1.11.2 (X:114-321) L-Ala-D/L-Glu epimerase {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  11  63...............................................................................DANESWRAEGLAARCQLLADLGVAMLE----QPLPAQDDAALENFIH---------PLPICADESCHTRSNLKALKGRYEMVNIKLDKT---------------GGLTEALALATEARAQGFSLMLGCMLCT....................................................................................................................................... 166
9 -6.360d1kkoa1 c.1.11.2 (A:161-411) beta-Methylaspartase {Citrobacter amalonaticus [TaxId: 35703]}  ali model 3D-neighbors follow..  90.....................................................................................DPVRCAEYIASLEKEAQGLPLYI--GPVDAGNKPDQIRMLTAITKERLGSGVKIVADEWCNTYQDIVDFAGSCHMVQIKTPDL---------------GGIHNIVDAVLYCNKHGMEAYQGGTCNETEISARTCVHVALA......................................................................................................................... 217
10 -6.220d1fvka_ c.47.1.13 (A:) Disulfide-bond formation facilitator (DsbA) {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  11  13......................................................EKPVAGAPQVLEFFSFFCPHCYQ---------------------------------EEVLHI----SDNVKKKLPEGVKMTKYHVNFMGGDLGKDLTQAW------AVAMALGVEDKVTVPLFEGVQKTQTIRSASDIRDVFINAGIK-EYDAAWNSFVVKSLVAQQEKAAADVQLRGVPAMFVNGKYQLNPQGMDTSNMDVFVQQYADTVK................................................................................ 183

FFAS is supported by the NIH grant R01-GM087218-01
1 3 7 7 9 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Sikora S, Godzik A. Combination of multiple alignment analysis and surface mapping paves a way for a detailed pathway reconstruction--the case of VHL (von Hippel-Lindau) protein and angiogenesis regulatory pathway. Protein Sci. 2004 Mar;13(3):786-96. Epub 2004 Feb 06.