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Query: sp|P07108|ACBP_HUMAN Acyl-CoA-binding protein OS=Homo sapiens GN=DBI PE=1 SV=2, from H.sapiens

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .
# Score Template Links and tools%idFirst MSQAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGILast
1 -62.200[I] COG4281 Acyl-CoA-binding protein  ali follow..  48  1MVSQLFEEKAKAVNELPTKPSTDELLELYALYKQATVGDNDKEKPGIFNMKDRYKWEAWENLKGKSQEDAEKEYIALVDQLIAKYS. 86
2 -18.300[I] KOG0817 Acyl-CoA-binding protein  ali follow..  39  41CLAELFEKAAAHLQGLIQVASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQKWEAWKALGDSSPSQAMQEYIAVVKKLDPGWN. 126
3 -6.600[S] COG4508 Uncharacterized protein conserved in bacteria  ali follow..  18  2....NLNKLFHLQKNLDTKIIDQKNLSSQNLYSQKALA--------FGELASKTRFNYWTTEAPCEKNAILEEYINCLHFILS.... 77
4 -6.110[S] COG4681 Uncharacterized protein conserved in bacteria  ali follow..  18  17LDRNQFLDASLTLARHPSETQERMMLRLWLKYADETRGLCADDEPEAWLRNDHLGIDLWIELGLPDERRIKK............... 94
5 -5.910[J] COG5225 Uncharacterized protein involved in ribosome biogenesis  ali follow..  14  43LSRDNVQQLVNKMISLPKERTSDGVL--LQLPETVTPLPRAKPLP---KPKPETKWQRFARIKGIAPKKREGRLVEASGEWVPKWG. 125
6 -5.610[L] KOG2475 CDC45 (cell division cycle 45)-like protein  ali follow..  12  296......RAHGKTPHDQSIRLEDEFRFMLVSLYDSMLHSAYVGSRLHIWSEEGRKRLHKLLAKMGLSLVECKQTYKSSLKRFAPFYGL 390
7 -5.440[S] COG3068 Uncharacterized protein conserved in bacteria  ali follow..  17  1MLQNPIHLRLERLESWQHVT--ERMYPNYAMFCQQT-------GFGDGQIYRRILDLIWETLTVKDAKVNFDSQLEKFEEAIPS... 81
8 -5.380[S] COG4499 Predicted membrane protein  ali follow..  23  321NGRGEFGKSLDIAKLL-----DDPTLAMYSLTKQIEQVQSD------------------TKLSGDEKVERLKTLEENLKEYDEKVN. 383
9 -5.330[B] KOG4715 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin  ali follow..  20  153..............KPPDKP-----LMPYMRYSRKVWDQVKASNPDVLWEIGKIIAGMWQDLADEEKEVEKIEYNESMNAHHNS... 224
10 -5.250[J] KOG1765 Regulator of ribosome synthesis  ali follow..  12  44EGTKLVQEIANKLFNFPSTETNDGPI--VQLPPPTTKLPREKHIP---RPKPPTKWEEFALKKGIQKKKEKVVWDEQTNQFKRRHG. 125
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Schwarzenbacher R, Godzik A, Jaroszewski L. The JCSG MR pipeline: optimized alignments, multiple models and parallel searches. Acta Crystallogr D Biol Crystallogr. 2008 Jan;64(Pt 1):133-40. Epub 2007 Dec 5.