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Query: sp|P69891|HBG1_HUMAN Hemoglobin subunit gamma-1 OS=Homo sapiens GN=HBG1 PE=1 SV=2, from H.sapiens

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGHFTEEDKATITSLWGKVNVEDAGGETLGRLLVVYPWTQRFFDSFGNLSSASAIMGNPKVKAHGKKVLTSLGDAIKHLDDLKGTFAQLSELHCDKLHVDPENFKLLGNVLVTVLAIHFGKEFTPEVQASWQKMVTAVASALSSRYHLast
1 -43.100[C] COG1017 Hemoglobin-like flavoprotein  ali follow..  14  2...LDAQTIATVKATIPLLTGPKLTAHFYDRMFTHNPELKEIFNM-----------SNQRNGDQREALFNAIAAYASNIENLPALLPAVIAQKHTSFQIKPEQYNIVGTHLLATLDEMFN--PGQEVLDAWGKAYGVLANVFIHREA 136
2 -25.900[C] KOG3378 Globins and related hemoproteins  ali follow..  18  256MDRITERQKHIFTETFPVIFKERNGLVLFAKYFSEFPHYKNIWPQFRTLQ-DSALLASNELANHCSVYMSGLKV......................................................................... 330
3 -7.860[S] KOG4654 Uncharacterized conserved protein  ali follow..  9  14..RPKEKVVYIYELLCRGEDPSSESPEFWNEFFLLQPNFEALENEIGKLNNEQLQLVKPNLNTLFQRCIEMLDTLCNSLHTLCSLFYGIFKKSNAEPTLN-EKMDEWLKLLMQYCNRILLGDVPENARFMCLKLLQVLVTGTDN... 167
4 -7.570[R] COG2346 Truncated hemoglobins  ali follow..  7  17.ATMSSETVTLYEAIGGDATVRALTRRFYELM-DTLPEAARCRA-----------IHPADLSGSEAKFYDYLTGYLGG---VEKHGHPMLRRRHFVAPIGPAERDEWLLCFRRAMDET---IENAKLREIIWAPVERLAFHMQNQ.. 146
5 -6.070[L] KOG2994 Uracil DNA glycosylase  ali follow..  12  100..CYVPLSELLVEESWLKALPGEFHKPYAKSL-LIYPPQHLIFNALNTTPFDRKTVIIGQDPYHGPGQAMGLSFSVPEGEKLPSSLLNIFKELHKDVGCSIPRHGNLGVLLLNAVLTVRSKQPNSHAKKGWEQFTDAVIQSISQQKE 265
6 -5.940[O] COG0576 Molecular chaperone GrpE (heat shock protein)  ali follow..  13  55.................................EVENRYLRMQADFENVKKRHIADRDASQKYRSQSLAQDLLPALDSFEKALATTSDQEEVKQILKGM-----EMVYNQILVAFEPAVGEQFDPNFHQAVMQD-NEITAELQKGYK 176
7 -5.810[O] KOG3003 Molecular chaperone of the GrpE family  ali follow..  11  71.................................ELMDKYKRSLADSENMRNRLNKQISDAKIFGIQSFCKDLLEVADTLGHATQAVPKDKLSGNADLKNLYEGLTMTRASLLQVFKRHINQKFDPNQHEALFQK-NTVVEVTKLGY. 196
8 -5.600[L] COG0692 Uracil DNA glycosylase  ali follow..  13  2.............KNWTDVIGTEKAQPYFQHTLQIYPPQEDVFNAFKYTAFEDKVVILGQDPYHGPNQAHGLAFSVKSLLNIYKELTQDISGFQMPSNGYLVKWAEQGVLLLNTVLTVERGMAHSHANLGWERFTDKVIAVLNEHRE 154
9 -5.460[P] COG0598 Mg2+ and Co2+ transporters  ali follow..  11  165FRKSNASATKKTRDLQSLIEQIGQKGDLLTVIRESLVSIGRLVAYHVAIEGSTPRKAAKESRQRIKLVQRDAASLGDHALFLSNKINFLLDATLGLINLEQNQFSVAAVVFLTLVASIYGMNFEVMPELTWRFGYPYALILMI.... 313
10 -5.430[Z] KOG0031 Myosin regulatory light chain, EF-Hand protein superfamily  ali follow..  12  20FSMFDQTQIQEFKEAFTVIDQNRDG-------IIDKEDLRDTFAAMGRLNVKNEELDAMMKEASGTVFLTMFGEKLKGADPEDVITGAFK--------LDPEGKGTIKKKFLEELLTTQCDRFSQEIKNMWAAFYKNICYVITHGDA 166
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Schwarzenbacher R, Godzik A, Jaroszewski L. The JCSG MR pipeline: optimized alignments, multiple models and parallel searches. Acta Crystallogr D Biol Crystallogr. 2008 Jan;64(Pt 1):133-40. Epub 2007 Dec 5.