FFAS03 results for HGC00024

Query: HGC00024 gi|162813637|dbj|BABA01031072.1|2.0 TMP01508;, from HGM_OVER

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 .`
#	Score	Template	Links and tools	%id	First	`MKNIYNTLGMTKACLCALAVSLVTTGCSDLLDKEPPSAISDGSFWTGEGDAMLALTGCYRFQTGWSHDDFATPQGLLYLDFAGGNGTEKENFSTLMASSNTVATNSNLRWYWGNAYTQIAKYNTFLENITDCPMEESKKEQWSAEVKCLRAYFFLNLAFYYTDVPMPLKTLSVDEANSISQTPQTEVYSQVEKDLKTAIDLLPVHYLRGIWRLPGGG`	Last
1	-8.200	`[R] COG4105 DNA uptake lipoprotein`	`ali follow..`	9	6	`VGQSKAPQRSVLLALSLVVPSLFLSACMS-LSKYVDQTEPADVLYNNAGRLDEASKKFDAVDRQHPYSEWARKSMVMGAFADYRKGSYDEAISSAKRYLALYPSTDDAPYA-KEARQTLQTMQDLVTRWPTSEYVDDAKEKILAGKEMQIGRYYLEVVENYSNTRHVEEALARLTESYYAMGLTSEA----QTAAAVLGTNYPDSPWYKDSY.....`	261
2	-7.930	`[R] COG3417 Collagen-binding surface adhesin SpaP (antigen I/II family)`	`ali follow..`	12	1	`.........MKKSVIALLGLAVILGGCSNKVSYGDAQAVETVNVDFGSTDLQKIAAEMVDSM--------------MMSGSVSAITRDGRPIVFVERIKNKTSEHIDTESITDTISTKMLNSGKFR-------VDMDRVEAVRDQLNFQNNDELVNFGKMVGAQYMLYGNLSSIVKNAGSDKDVYYKMTMRLMDLQTGL..................`	176
3	-7.850	`[M] COG3065 Starvation-inducible outer membrane lipoprotein`	`ali follow..`	10	1	`MTQSKKFRNHKWMYGWLGLGALLLSGCVTIPPAIQGTTATPLQDLNLIRSAPKLFIGQEARFGG------------------------------TVVNVKNEPNRTR-----------LEIASVPLDSGARPILGEPSQGRVIAYVDFLEPVDF-HLVTVVGPIVGVEAGKIGMTPYNFVVIKATGYK.............................`	149
4	-7.620	`[MP] COG3015 Uncharacterized lipoprotein NlpE involved in copper resistance`	`ali follow..`	7	2	`VKKAI-------VTAMAVISLFTLMGCNNRAEVDTLSPAQAAELKPMPQSWRGVLEGIETSLFLEKDGTWVMNERYLGAREEPSSFASYGTWARTADKLVLTDSKG------EKSYYRAKGDALEMLDREGNPIESQFNYTLEQSSLPMTPMTLRGMYFYMADAATFTDCATGKRFMVANNAELERGYLAARGHLLSVEGHFTLEANPDTGAPTK..`	215
5	-7.090	`[I] COG1562 Phytoene/squalene synthetase`	`ali follow..`	8	13	`..........................ALKVLQE------TSRTFYIPPDQLLDAVASAYLCMR-------------AIDEVEDHPDLDAETKARILNQISLNLQSATENSHSEDFIRGLDPYRNLLPEVTLRRVWDATAAMSDRMAFWLDQYTFS-VAGAVGLLLSDLWAWHDGTQTNRSHAQAVNIVRNYKEDKRRGVSFFPQGWELADM......`	214
6	-6.690	`[K] KOG1657 CCAAT-binding factor, subunit C (HAP5)`	`ali follow..`	18	43	`.....................................................................................................QQLTQQLQSFWETQFKEIEKTTDFLARIKKIMKADEDVRMISAEAPVVRACEMF----------LTLRSWNHTEENKRRTLQKNDIAAAVTRTFDFLVDIVPREDLRDEVLGGVGA`	161
7	-6.470	`[R] COG3489 Predicted periplasmic lipoprotein`	`ali follow..`	12	1	`.........MLKRSTLVLVLPLALLGVFPASAAVKASDIIQG--------IDGFVRPAYADLHQHAEALTRAMHTLCKAPSQGELDAARAEFSATVYAWSSAEI-----LYWPDRKSIGLKVQAALADKDPTASDPAQLAGKSVAMQGLGALEFV----LFGD--------GADALAGKDDPYRCAYGAAVAGNIETMAGDVSAAWNKPDGFAAL..`	198
8	-6.240	`[C] KOG4077 Cytochrome c oxidase, subunit Va/COX6`	`ali follow..`	16	42	`.................................................................................................SHGSQETDEEFDARWVTYFNKPDIDAWELRK----GINTLVTYDMVPEPKIIDA---LRACRRLNDFASLVRIL---EVVKDKAGPHKEIYPYVIQELRPTLNELGISTPEELG......`	146
9	-5.590	`[D] COG2385 Sporulation protein and related proteins`	`ali follow..`	8	15	`.SLPTNLRVLLPWLQLIGKSSFFGLIISLAWTLSAQAMELRVAISKGVSNVGVGSSTPALVKNAGGATIGRLDSLVPANATASGRNINLAG--MQASQITIEPSGDGRIWIGDRWYRGLIRQGNGVSAVNLVDIEEYLYEALKAQAVAARTYAIYQTSK------------DSNRYYDLDTTTATQVYKGMNNEMTYNGKVILAAFHAASGGHTENV`	247
10	-5.490	`[S] KOG2477 Uncharacterized conserved protein`	`ali follow..`	14	1	`.........MVRPVLDIPVPGLLI--CSGYQSRNDGPVLE----FPNPGRFSLPVNSLFSLV-------------------------------------------SVLQKLWTGYWIHIPALNLSIEQSKSFPSSEQSSSSIAGVAVFF--FFFFRL--------LIISPTGPWTDIVNMFSGIKI...............................`	122

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

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