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Query: HGC00267 gi|163310129|dbj|BABD01000566.1|6.0 TMP00066;, from HGM_OVER

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MDEKEVSEMQEEMMTVLVVEPMKAPYVKHIPNELEDLQQAVGGDIEMTYPFDDEVGILLNGNGKFEGLPLNRALYDDHGQVYDAIAGTFLVVGLTEDDFTSLTPEQIEKFKEKYQSPEIFTLFNGELHVMKMPPEEEKEQKESRKNDAKQKNPAKKKNRSGDARLast
1 -6.990[G] COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID  ali follow..  17  1MSENKVTLDKKIRRSVMW-----RSMFLQGSWNYERMQNG--GWAYSLIPALKK--LYPSGEEAKEALKRHLEFFNTHPYVAAPIIGVTLALEEERANGADIDDAAIQGVKVGMMGP............................................... 108
2 -5.730[HC] KOG0534 NADH-cytochrome b-5 reductase  ali follow..  9  198.......RDPIDATQIRLLFANQTEDDILCRKELDELAEKHPTRFRVWYTVSKASKDWRYSTGHINEEMIKEHLFPSNEESAVLLCGPPAMINCA--DKLGHNSENYLIF...................................................... 303
3 -5.540[R] COG3054 Predicted transcriptional regulator  ali follow..  10  81IEAIKSAKLPHDRYQTTTI--------VNTDDAIPGSGMFVRSSIESNKKLYPWSQFIVDSNGVARNA-SAVIVLDKDGRVQWVKDG-------------ALTQQEVQQVVDLLHK................................................ 181
4 -5.410[R] KOG3135 1,4-benzoquinone reductase-like; Trp repressor binding protein-like/protoplast-secreted protein  ali follow..  11  1............MPRVAIIIYTLYGHVAATAEAEKKGIEAAGGSADIYQVEETLSPEVVKALGGAPKPDYPIATQDTLTEYDAFLFGIPTRFGNFPAQWKAFWDRTGGLWAK.................................................... 100
5 -5.320[R] COG0354 Predicted aminomethyltransferase related to GcvT  ali follow..  19  5..............SKTVNLSYRALVHITGEEAEKFLQAVITTNLDQLGPHELKPGALLTPQGK--------------------ILFDFLVSRIEGGLRFDLPADVAGDFVKRIT................................................. 85
6 -5.290[S] COG1520 FOG: WD40-like repeat  ali follow..  9  113..............KLFIGSENGVVNALDAETGEPLWASAIEGEVLAAPAADNNIVIVNTSRGALIALNQED-NLTLRGDSRPTAVAGGVFWGTPSGRLAAAIAER.......................................................... 215
7 -5.250[F] KOG1622 GMP synthase  ali follow..  16  57.LETPAFAIKEQGFRAIIISGG-GKPVLGICYGMQMMNKVFGGTVHKKSVREDGVFSVDNTCSLFRGLQKEEVVLLTHGDSVDKVADGFKVVARSGNIVAGIANESKKLYGAQF-HPEVGLTENGKVILKNFLYDIAGCSGTFTVQNRELECIREIKERVGTSK 238
8 -5.130[C] KOG3309 Ferredoxin  ali follow..  9  69.TSSENGDEETEKITIIFVDKDGEEIPVKVPIGMSVLEAAHENDIDLEGACEASLAIVMDTEEEPTDEENDMLDLAFGLTETSRLGCQVIARPELDGVRLAIPSATRNFAVD.................................................... 190
9 -4.970[S] COG4102 Uncharacterized protein conserved in bacteria  ali follow..  14  248GSTLGGFMTQAGGPQIAAVSLDGANQPGQIATRLVNMDAVLDGLHTGLGAEWKNTVVLVTEFGRTARVNGTG--TDHGTASTGLILGGALKPGGIVGDWPGLADKAL......................................................... 358
10 -4.960[R] KOG2719 Metalloprotease  ali follow..  10  204...........MTIYPVLIAP-TPLPDGDLREKIEKLASSLKFPLKKLFVV----------DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNEDEIVAVIAHELGHWK..................................................... 297
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;