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Query: HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561;, from HGM_OVER

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MIYLHARGLFHVLLLICNRELLLIGKRKDEDDMAKSTKTYEERIRALEKKEQESIEATKKLIAQRKELEKRKKAEESKKRTHRLCQIGGAVESVLGCPIEEEDLPKLIGFLKRQETNGKFFSKAMQKELVTDMEEVLast
1 -6.920[O] COG5380 Lipase chaperone  ali follow..  14  219.........................................TRLEQLDRQRSAWKGRLDDYFAEKSRIEGNTGLSEADRRAA--------VERLAEERFSEQERLRLGALEQMRQAEQR................. 288
2 -6.440[S] COG3234 Uncharacterized protein conserved in bacteria  ali follow..  10  147MIFFDQGDAQHLMVWMGRYVIYHTGSATKTDNGMRAV-SLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR................................................................. 216
3 -5.800[J] KOG1646 40S ribosomal protein S6  ali follow..  22  200..........................KKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK............................................................ 249
4 -5.770[S] COG1284 Uncharacterized conserved protein  ali follow..  11  173TVFGLQGALLSVIAYYIASKVI---------HVVEEGLSGSKTFQIITTQPELMVETIRDQLGRSATYKEAYGGFSHEKFKEITCVINRLEETKLKEIINDIDKTAFVTVYDVAEVKGSNFRN............. 286
5 -5.680[S] KOG4811 Uncharacterized conserved protein  ali follow..  27  1................................MAKSLRSKWKRKMRAEKRKKNAPKEASRL........................................................................... 29
6 -5.620[S] KOG2885 Uncharacterized conserved protein  ali follow..  22  343.................DEKLLRKAIKRKEAQKRKSAIEWSERKRVVEDTISERQKRREENLRIRKDNKGKKRNKQEKMK........................................................ 405
7 -5.550[S] KOG2637 Uncharacterized conserved protein  ali follow..  22  421........................NESKEDKRARKQAIKEERKERRVEKKANKLAFKLEKRRQEKELLNLKKNVEGLK.......................................................... 474
8 -5.450[P] COG0369 Sulfite reductase, alpha subunit (flavoprotein)  ali follow..  15  468..FIQARSVLKKEGSTLGEALLYFGCRRPDHDDL-----YREELDQAEQDGLVTIRRCYSRVENEPKGYVQHLLKQDTQKLMTLIEKGA-VERTLRLAYEAESQEESAVWLQKLQDQRRYVKDVWTG......... 603
9 -5.430[S] COG1627 Uncharacterized protein conserved in archaea  ali follow..  18  1..............MIYNRSVVS--------AVAEDIEEKIRRLRELGRIVTETEEQPPTPGPPKPPRRRVSRIGTFRERERR-IIIGALVLTII......................................... 74
10 -5.420[R] COG3565 Predicted dioxygenase of extradiol dioxygenase family  ali follow..  10  2.....SLMPFHLAIPV--------------HDLPAARRFYGE-VFGLSEGRSAEHWVDFDFFGHQLVIHQHPQTDSQRHAGSNPVDGHDVPVPHFGVVLAWDDWHALAERLQQR...................... 95
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Tolerating some redundancy significantly speeds up clustering of large protein databases. Bioinformatics. 2002 Jan;18(1):77-82.