|
current user: public |
|
Query: PB004996 Q5NNS6_ZYMMO/1-150 PB004996; Pfam-B_4996;, from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 | |||||||
# | Score | Template | Links and tools | %id | First | MANLDVLFERLSRSSFRRRFRLGVQEQQYLANKGMETILEHGKDFIAQRLAPAEIPNDGKQTPCKGHPVFLAQHATGTCCRGCIEKWHRIEAGKSLSQEEQAYILDVIAHWLDLQKEVPPKKTKAATLNLPKKRKSKAEDVQGSLFPEIE | Last |
1 | -7.420 | [C] COG3245 Cytochrome c5 | ali follow.. | 17 | 22 | ...........................FALTEADKNAIAERIKPVGDVYLAGSEPVQAAPTGPRDGATVYGTF------CTACLNGFNAMPPCMDCSDDEIVAAIEHMIAGL...................................... | 135 |
2 | -7.420 | [J] COG1998 Ribosomal protein S27AE | ali follow.. | 31 | 8 | ................................................EIADGKLVRKHRFCPRCGPGVFLAEHADRFTCGRC................................................................... | 42 |
3 | -7.420 | [U] KOG1733 Mitochondrial import inner membrane translocase, subunit TIM13 | ali follow.. | 18 | 37 | ......................................................................LVTDISEKCTNKCITA-----PGSSLASGEKQCLQRCMDRFMESWNLVSQTLQKRLQEEMASSGGMGGGFGQGPSF.... | 107 |
4 | -7.270 | [R] COG3313 Predicted Fe-S protein | ali follow.. | 16 | 1 | ......MFASIMFGVFVHALECSRPVGLVQAKLLLWALTASIM--VIILFEEGEVAEQLEFFPVQSPCRGICQSDERGFCRGCFRSRDERFNWNKMSDGEKQEVLRLC-------------RQRLMRKLRANKPASSDEPEQPSLF.... | 125 |
5 | -7.050 | [U] KOG3489 Mitochondrial import inner membrane translocase, subunit TIM8 | ali follow.. | 23 | 35 | ......................................................................LVHQMTELCWEKCMDK-----PGPKLDSRAEACFVNCVERFID..................................... | 72 |
6 | -6.770 | [U] KOG3480 Mitochondrial import inner membrane translocase, subunits TIM10/TIM12 | ali follow.. | 20 | 28 | ......................................................................LFNKLAQTCFNKCVDKRY---KEAELNMGENSCIDRCVSKYWQ..................................... | 67 |
7 | -6.690 | [U] KOG3479 Mitochondrial import inner membrane translocase, subunit TIM9 | ali follow.. | 18 | 29 | ........................................................................SNLVERCFTDCVNDF----TTSKLTNKEQTCIMKCSEKFLK..................................... | 65 |
8 | -6.640 | [S] COG4844 Uncharacterized protein conserved in bacteria | ali follow.. | 14 | 29 | ....................................................................LDVLEYGCLSYCGTCMESLFALVNGEVVMGETPAELVENIYTFIEEN................................... | 75 |
9 | -6.600 | [S] COG3139 Uncharacterized protein conserved in bacteria | ali follow.. | 19 | 39 | ...................................................................................LGKW---PDGVALTEEQKENCLQLVMLWQARNNTEAQHMTIDTNGQMVMKSKQQLKEDFGISAKPI. | 101 |
10 | -6.550 | [C] COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit | ali follow.. | 16 | 323 | .......................................................................ADSLYNGTCNQC-NGWIGTLNGMSLDKREER----TLLKYLQMNASDTTNTPHSDKGEHNEK................. | 394 |
FFAS is supported by the NIH grant R01-GM087218-01
|
![]() ![]() ![]() ![]() ![]() ![]() |
Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40. |