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Query: PB007733 A3U921_9FLAO/1-209 PB007733; Pfam-B_7733;, from HGM_OVER

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSFSYSQVESKPQDSTEREYDYMIIEGDTIPREFIDLEEVIILNKIKFTSDLERRRYLILRRKTRKVWPYAKLASERLSELNARLASIKSKSERRKYTKIVQKYIEEQFAAELKKLTRTEGQILVKLIHRQTGVTTFQLIKNLRSGWRAFWYDTTAGLFDIELKSEYNPVNNREDFLIEDILQRSFQRNILDNQPSVLNIDYFEASSKWLast
1 -8.050[G] COG0383 Alpha-mannosidase  ali follow..  13  20..................................................................YFTTEESRILLVNNMEEILCRLEQDNEYKYYVLDGQTAILEDYFARVKKQ-VEAGKLIITIVSAES------IVRNLMYG------MRDCLAFGEPMKIGYLPDSFGMSGQLPHIYNGFGITRTMFWRGCSERHGTDKTEFLW 165
2 -7.480[Z] KOG2046 Calponin  ali follow..  8  21..............................................................................ADVQNRLLPKYDSQKEAELRSWIKGFTGLSIRPDFQK-GLKDGIILCTLVNKLQPGSVPKINGELALARKPLQLPQGNGQLRHDPVDLFEANDLFESGNNMQVRVSLLALAGK.................. 135
3 -6.920[R] KOG1877 Putative transmembrane protein cmp44E  ali follow..  12  34.....................................................VKRYKKL---IAEIFPRNQEEGINDRKIGKLCEYAAKNAVRMPKFFQISDSLEHRCYKELRNENFHSAKIAMCIYRR--------LLVTCKEQIPLF--SGFLRTVQALLDQTRQDE....................................... 138
4 -6.160[G] KOG0799 Branching enzyme  ali follow..  10  113...................................................KSRIIPKTAQFKPLKLNGFARIVFADYEFIEKQVQAS---HPQNVFCFAIDANSSAEFQRKMKKLEQCLPNVVVLPVTESYDSKGHNINLAHYNCMKKLEWGYLMLLQNHDTKSVYE---------LDRIFELLGGVNDVFMSR.............. 253
5 -6.090[L] COG0177 Predicted EndoIII-related endonuclease  ali follow..  11  23...........................................KPVRVKTAYSKDELTEIFRRFSIQRPEPKGELEHTNPFTLLVAVALSAQATDVGVNRATRALFKVA-DTPEKMLALGEEQLIGHIKKNVIALSQMLIDNFGGEVPKTR-EELVTLPGVGRKTAFGVPTLAVDTHVFRIANRL........................ 178
6 -6.090[A] KOG0108 mRNA cleavage and polyadenylation factor I complex, subunit RNA15  ali follow..  13  1.......................................................................................MSMTAGNVVFVGNIPYDVSEQ---QMTEIFNQVGPVKFKLVDPETGSGGFCEFFDSETTAMAVRKLNNSELGPRKIRVEFPSNDPRRN.................................. 90
7 -5.880[G] COG4678 Muramidase (phage lambda lysozyme)  ali follow..  10  78.................................................................YLRALMRTISASEANTPQPYNVIYGGQHVQDLSEHPNRCVKIFMGPNRGNCSTASGR--------------YQFLNT---------WAEKAGKYHPQ-NYSFEPEY--QDQVLYRWLADQLRAGHLDQ--------LRHLSPTW 207
8 -5.780[R] KOG3139 N-acetyltransferase  ali follow..  14  245...................................NTQDIMRLIQAELSEPYSIYTYRYFIYNWPKLCFLASHDNQYVGAIRGYIAMLAVRKEYRK------LKIGTTLVTKAIEAMLADNADEVVLETEMRNQPALRLYENL--GFVR-----------DKRLFRY--YLNGVDALR............................... 377
9 -5.720[O] COG2192 Predicted carbamoyl transferase, NodU family  ali follow..  9  388.....AVYTVLSDDDLIARTVDAIVDEKAVMQGRMEFGPRALGGRSILGDPRSPIMQKTLNLKVKYRESFRPFAPSVRREDVAEWFDVDVDSPYMLLVGDVLDRRLNVPRSGIPAVTHVDYSARVQTVHRDTNPRYWELLSAFKQ-------TGCPVLVNTSFNVRGEPIVCTPEDAFRCFMGTEIE...................... 581
10 -5.640[N] COG1334 Uncharacterized flagellar protein FlaG  ali follow..  8  46.........................................................................................YKPKLELLSERLNEEMKRIGTDINFSYNDTIKGLVVSVKDANGD----KVIREIPSKEAVELMQRMRDVIGIIFDKR........................................... 118
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.