FFAS03 results for PB034883

Query: PB034883 _HOMD.0130261_ bfor_c_1_4664 Tannerella forsythia ATCC 43037 [1809083 - 1810348] ORF, from HGM_OVER

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 .`
#	Score	Template	Links and tools	%id	First	`MRKELHNTKVTVRLRKSAYRNEWYLYIESYPVYTAGKSEPQRVREYLNRIVTTVVWDKTRTARTTSSSKSYKPKRDLNGVIQCKSEVDQEACIYADEVRKLRQREYDNADLYSDADTAQAEQKERLQQNFIGYFREAMYKRHKNSSTSILVNWKRAMDFLKMYAGENLPFFKIDNAFAEEYKRFLLTAP`	Last
1	-5.620	`[O] KOG4761 Proteasome formation inhibitor PI31`	`ali follow..`	7	1	`....MAGLEVLFASAAPATCRQDALVCFLHWEVVTLGVGDQPGPNDKKSELLPAGWNNNKDLYVLRYEYKDGSRKLLVKAITVESSMILNVLEYGSQ--QVADLTLNLDDYIDAEHLGDFHRTYKNSEELRSRIVSGIITPIHEQWEKANVSSPHR.................................`	156
2	-5.030	`[U] KOG3487 TRAPP 20 K subunit`	`ali follow..`	6	76	`..VTAGHMRFIMLHDIRQEDGIKNFFTDVYDLYIKFSMN----FYEPNSPIRSSAFDRKVQFLGKK...........................................................................................................................`	136
3	-4.960	`[NU] COG1677 Flagellar hook-basal body protein`	`ali follow..`	16	21	`.........................................................................................................................AKTDNATGAGNTFTQMLDSMSDTQSNAQTSVSNNASDVLIQMKKAESEMKVIRDNVIESYKQLLN...`	95
4	-4.900	`[O] KOG4413 26S proteasome regulatory complex, subunit PSMD5`	`ali follow..`	3	443	`...................................................................................................................................EIINIVTDATTETAKIAMEARYNCCKAIHEAFLCSNFVDDPRRLKTGDKLQEAVRSGP`	500
5	-4.790	`[P] COG0306 Phosphate/sulphate permeases`	`ali follow..`	4	375	`........GIGLISSDLLGVLVAFAILVILSGYIYARSRRVP----VDPSNVNADWNEESNSVEPATPSAPAASEITEAPAAPAAQAVQDLNNENEVTK..........................................................................................`	461
6	-4.500	`[RT] KOG4070 Putative signal transduction protein p25`	`ali follow..`	15	1	`....................................................................................................................MAASTDMAGLEESFRKFAI--HGDPKASGQEMNGKNWAKLCKDCKVADGKSVTGTDVDIVFSKNYEEFKK...`	77
7	-4.420	`[L] COG0582 Integrase`	`ali follow..`	8	1	`MSMAITDAWLRATNGKPYSGHRFGLGVRVSP-VYRANINGKMQRIKLGEY--------------------------------------AMKLRDAIQARESRAELVELG---FDPRKSTRSANDDSIITLNDLIDYWAENHARDNIKQCDALLKMFHTDITPTLG-NYPAKQLELIDFMPVFLKAKRR.`	157
8	-4.410	`[S] COG1849 Uncharacterized protein conserved in archaea`	`ali follow..`	9	1	`........................................................................................................................................MLEEELARKIERYFSIEEEALKKIRISPAEGSFLRKIAEDNMQMILSYYSDA.`	52
9	-4.400	`[S] COG4066 Uncharacterized protein conserved in archaea`	`ali follow..`	15	4	`.............................................................................SSDIPEKMTEMQLLEMLKKEASSVHIKDIMSASVYLREDARYLPPREQKERAFFNRIRDIKNDKNIYQGHVDTAGLKEFIDFLDQQLSQAKTENERCARIITIYVTFVRKEP`	125
10	-4.330	`[Z] KOG3565 Cdc42-interacting protein CIP4`	`ali follow..`	12	1	`MQKLASQLKRDWPGVKADDRNDYRSMYPVWKSFLEGTMQVAQSRMNICENYKNFISEPARTVRSLKEQQLKRCVDQLTKIQTELQETVKDLAKGKKKY------ETEQMAHAVREKADIEAKSKLSLFQSRISLQKASVKLKARRSECNSKATHARNDYLDRYYQTDLVMKALDGNVYDHLKDYLIA..`	195

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

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