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Query: HGC00166 gi|163579340|dbj|BABE01005762.1|1.0 TMP00473;, from HGM_OVER

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKEHKEVSALLQQAKQERRCCYGTSDAQRRALKRRLHAGELVSPYKNLYADRTLWNTMTREQQSLQVIRALSAIHPQWVFAGLSAACVYGLQHNYSLHDGTVHIASKSGIGGGDEARLNRIYINRIPTRKHNGILLTTPARTLLDCAVFPFPQALPIYDSALRKSLTTIEEVQSLMIQSVCDEVSVTKLLKYANPLSENGGESLMRGQITELSFGSSCWQCSSLast
1 -6.290IDP92056 orotate phosphoribosyltransferase, putative [Toxoplasma gondii ME49] TGME49_059660 [Toxoplasma gondii ME49]  ali follow..  48.................................GALKFGEFK-LKSGFFFNAGMFGN-GQAMELISKAYATEIVRSGVEYDVLFGPAYKGIPI----VACTAMSLNRVYSQPAPFIYDRKEAKDHGEKGVLVGALNQLEPKQIPGTTDKYRPARVLLLDDVLTSGTAIRGNM-KLLQELQHTVAGIFVLLDRQERVSEDADLSAAEQLEETYKTKVFSV.... 232
2 -5.440IDP06467 gene: E9R; E9R [Monkeypox virus Zaire-96-I-16] NP_536533 [Monkeypox virus Zaire-96-I-16]  ali follow..  10  12............................................................................................................ETPRELISIKRIKDIPRSKDTHVFAACITSDGYPLIGARRTSFAQAILSQQNSDSIFRVSTKLLRFMYYNELREIFRRLRKGSINNIDKESIKDCLRRELKEESDEHITVKEF.. 140
3 -5.300IDP06291 hypothetical protein SP_1851 [Streptococcus pneumoniae TIGR4] NP_346283 [Streptococcus pneumoniae TIGR4]  ali follow..  41.................................................................................................................................NAHGGYLFTLCDQISGLVVISLGLDGVTLQSSINKAGKLDDVLTIKGECVHQGRTTCVMDVDITNQEGRNVCKATFTMFVTGQRSEERRVRI.. 134
4 -5.240IDP93866 uroporphyrinogen-III methyltransferase [Yersinia enterocolitica subsp. palearctica Y11] YP_006005134 [Yersinia enterocolitica subsp. palearctica Y11]  ali follow..  44LAEAPDGCEMINVGKTPNHHLVPQPQINEILVDCAQRGLNVVRLKGGVFGRGG-------EEAEALALAEIAFEVIPGISSAIGGLAYAGIPVTHRDYASGFHVVTGHLRQGNEPQDWATLAKLEGTLIILMGMQLATICQQLIAGGKAPTTPAAVVMYASHQQQQVASGTLTTLADQVAAQGLSAPALIVIGD............................. 234
5 -4.910IDP02742 hypothetical protein GBAA2122 [Bacillus anthracis str. `Ames Ancestor`] GBAA2122 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  12  12.............................................................EKIINNIEKLMVGKRKETILALTALLAEGHVLLEDVPGVGKTMLVRALSKSIDADYKRIQFTPDLLPSDVTGVSIYNPKELQFEFKPGPIMGNFILADEINRTSPKTQSALLESMEEGNITIDGMTRPLPFFVMATQNPVEY-------EGTYPLPEAQLD. 167
6 -4.900IDP06499 hypothetical protein spr1856 [Streptococcus pneumoniae R6] NP_359448 [Streptococcus pneumoniae R6]  ali follow..  8.................................................................................................................................KVEQQAIKNIQFLEQDLPKNPLEKECLAVSRVLHHMPDLDAALSLFHQHLKEDGKLIIADFTKTEANHHGFDLAELENKLIEHGFSSVHSQ... 100
7 -4.830IDP06472 gene: E10R; E10R [Monkeypox virus Zaire-96-I-16] NP_536534 [Monkeypox virus Zaire-96-I-16]  ali follow..  14  1...............................................................................MSFYRSSIISQIIKYNRRLAKSIICEDDSQIITLTAFVNQC--LWCHKRVSVSAILLTTDNKILVCNRRDSFLYSEIIRTRNMYRKKRLFLNYSNYLNKQERSILSSFFSLDPATKRGENVPECLSREIKEEVNIDNSFVFI.. 155
8 -4.800IDP04084 uroporphyrin-III C-methyltransferase [Vibrio cholerae O1 biovar eltor str. N16961] VC2561 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  85MALIPSETILVCVGKRAGHHSVPQEKTNQLLVDFARQGYRVVRIKGGMFGRGG-------EELEVLFEAGVKFQVVPGITAAAGATAYAGIPLTHRDYAQSALFVTGHLKAQAEDLDWSTLARGKQTLVIYMGLNAAAIAEQLQLHGRQASTPVAIIERGTQVNQQVLIGTLQTLPSLASQAQSPALIVVGEVVALAAK........................ 280
9 -4.580IDP02046 gene: bioB; biotin synthase [Coxiella burnetii RSA 493] CBU_1007 [Coxiella burnetii RSA 493]  ali follow..  10  111.....KVLEMIKSVKALGLETCVTLGMLDQEQALQLKEAGLDFYNHNLDTSPEFYKKIITTRTYQDRMETLKNVRNAGI--NVCCGGILGMGESRADRIQLLLELYQLPEPPTSIPINQLIPIKGTPLENTKAIDPFEFIKTIA-ITRLLFPTSVIRLSAGREAMSDELQAW--CFMAGANSIFYGDKLLTAKNPGQNRDVN-----LLKKLGLKVPV..... 313
10 -4.450IDP00490 putative iron-siderophore receptor YPO1537 [Yersinia pestis CO92]  ali follow..  10  1.........................................................................MRILEKNHGKSRVRFNCTHPIKPAAWVLAANVSLLGCAYAATDENNSQKKERENNPANTTITVTASPLRNTSSMSTATGLNISARETPQSVSVLTKQRMRD------QNLNSVESAVNNITGISVRQFDS-DRFGFTSRGMAVNNVMRD. 153

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 6 1 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Godzik A., Rychlewski L. A support vector machine approach to the identification of phosphorylation sites. Cell Mol Biol Lett. 2005;10(1):73-89.