FFAS03 results for HGC00962

Query: HGC00962 gi|162759780|dbj|BAAZ01005693.1|3.0 TMP01305;, from HGM_OVER

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 .`
#	Score	Template	Links and tools	%id	First	`MYFGAILCKKARQLRVYKAFGGRRHTEGRCSSIDENGKSRHSVWLSDDVWQEVDAFYKLDNCPIRNEFAEKALRQYCGRLHAERTGAYLPRALQGVLEGTLGVFGERLGRLLLKLAVEHNMTNHLLGGDMDMTRDEYSKMRGSSVREVSATHGTISFKDVMVFYKED`	Last
1	-9.970	`IDP06052 hypothetical protein jhp0557 [Helicobacter pylori J99] NP_223275 [Helicobacter pylori J99]`	`ali follow..`	28	61	`...............................KMSKERRIHHNLLLSPSFMAKVDEYMKEKGFPNRSLLFEKALEFYM..........................................................................................`	106
2	-6.820	`IDP91018 hypothetical protein y2737 [Yersinia pestis KIM 10] y2737 [Yersinia pestis KIM10+]`	`ali follow..`	12	93	`............................RHFNAEHQHTRKKSIDLEFLVWQRLAVLARRRGN-TLSDTVVQLIEDAERKEKYASQMSSLKQDLKDILDKEV..................................................................`	164
3	-6.530	`IDP04078 gene: YPCD1.09c; hypothetical protein YPCD1.09c [Yersinia pestis CO92] YPCD1.09c [Yersinia pestis CO92]`	`ali follow..`	15	13	`.....................................AHVTSVTLGEHLTGFVGEMIQSGRYGNISEVLRDALRLM----AREQRVQHVRDMVLAGTNV....................................................................`	71
4	-6.320	`IDP91407 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase [Vibrio vulnificus CMCP6] VV1_0729 [Vibrio vulnificus CMCP6]`	`ali follow..`	10	62	`.................................EDGKEFSKEFYWEVDWMIGFESAILQQASPFLLETLTPVHLLTFPIELLQHWRSTHHPLYTHLLETQLVYKERKERFLLLHTPEQERLSDRQIAAYLGITPVSLSRIKNR........................`	184
5	-6.250	`IDP90124 unknown [Monkeypox virus] MPXV_ZAI1979_005_036 [Monkeypox virus]`	`ali follow..`	10	22	`...............................EASDNDDRDYVYPLPENMVYRFDKSTNLDYLSTERDHVMMAVQYYMSKQRLDDLYRQLPTKTRSYV--------DIINTYCDKVNNDYNSDMNIMCDMASTESFTVYDINNEVNTILMNNKG..............`	136
6	-5.730	`IDP02557 gene: fliA; flagellar biosynthesis sigma factor [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0061c [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]`	`ali follow..`	10	125	`...............................CEPDDEYLAKKLDLDVEKIKEVRTAHAISYTLPIDEQIELY--------EDNTLEKIEKEELLEKIHEVLDDLKER-DQLIIQLYYYEELSLKEISEILQISESRISQIHKKLLKKLRE.................`	235
7	-5.510	`IDP05057 gene: fliA; RNA polymerase sigma factor for flagellar operon [Clostridium difficile 630] CD0266 [Peptoclostridium difficile 630]`	`ali follow..`	9	111	`............................KELKVSEKELHDIESNIDMLNIVSLNYVIFEDTNETVQDVISDR--------EEAPENIIEEEEKLEILSKAISNLNER-EKLILSLYYYEDLNLKEIGKVLGVSESRVSQLHRKSIRNLRNKIKELKYS.........`	232
8	-5.480	`IDP91271 prophage LambdaBa01, positive control factor Xpf, putative [Bacillus anthracis str. Sterne] NT05BA3690 [Bacillus anthracis str. Sterne]`	`ali follow..`	13	90	`..................................................................................HQQEHSIGEWDKVRLEDALSLLTER-EKEVYLMSRGYCLTYREIARYLDITCSTVQSMIERAEKKIAR.................`	156
9	-5.300	`IDP91757 VF01_VACCW [Vaccinia virus WR]`	`ali follow..`	11	28	`...............................EASNNVDHDYVYPLPENMVYRFDKSTNLDYLSTERDHVMMAVRYYMSKQRLDDLYRQLPTKTRSYI--------DIINIYCDKVSNDYNRDMNIMYDMASTKSFTVYDINNEVNTILMDNKG..............`	142
10	-5.230	`IDP06400 gene: ORF55; ORF55 [Human herpesvirus 8] YP_001129408 [Human herpesvirus 8]`	`ali follow..`	15	56	`................................................................QSNLGTTALQTYLLAVQSNKITDYLKRDVAKIPAGCQETVKTQVKKLQSIQNVVWNTMLALAVGEITVDDSALQSLLNKSLMEMEKLATAMASDDSVIWASE.`	165

FFAS is supported by the NIH grant R01-GM087218-01

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