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Query: PB001572 gi|163816107|ref|ZP_02207475.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]gi|158448527|gb|EDP25522.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759], from HGM_OVER

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst GAITFVEREAAAYDEAAVMANKQARLDAEKSINMVGSGVMHEKSPAHSGCPGSMARSIFRRPAAASGEAVQASSYEQAAVECVQNTTDKTVNQQAGDIYNYERPSQLTQWPVQIKLAPVNAPYFDGAKLLIAADCTAYAYASFHEKFIKGHVTLIGCPKLDSVDYSEKLTEIIRRNDIQSVTIVRMEVPCCGGLEMAAKKALQDSGKFIPWQVATISIDGRILLast
1 -6.570IDP05134 gene: sip2; singal peptidase I [Clostridium difficile 630] CD0555 [Peptoclostridium difficile 630]  ali follow..  13  9..........................................................................................................................IVEWIKIIITALFFAFIITRFIKPTLVNGESMYPTLKSHDYLVANRMTYKLSEPKCGDIMIFKTDLL--GRKKELVKRVIGVPGDHLKIKDSKVYINGKLL 110
2 -6.520IDP00572 gene: lepB; lsignal peptidase I YPO2717 [Yersinia pestis CO92]  ali follow..  8  28...................................................................GPARQAKIAAVNAQTAEIKAQTGCAVDNKTLAQAAKQPGWIETCASIFPVLALVFIVRS----FIYEPFQIPSGSMMPTLLIGDFILV-----EKFAYGIKDTTLIPTGKPNRGDIAVFKYP-----LDYIKRVVGLPGDRVIYNPISKEVTVQPS 177
3 -5.800IDP01462 signal peptidase I VC2462 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  11  35..................................................................................QAHLQAQTPDMPASALDKVVAQPWWIENSVSIFPVIAFVLVLRS----FIYEPFQIPSGSMMPTLLVGDFILV-----EKYAYGLKDTQLVETGKPERGDIVVFKYPVNPEIDY-IKRVVGMPGDTVRYSAGKELCIQHQG 169
4 -5.730IDP02498 gene: lepB; signal peptidase I [Francisella tularensis subsp. tularensis SCHU S4] FTT1556c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  10  44..................................................................................DELKGLSKKQKRQFYKDRGLKAPFIADQARSLFSVFFVVFLLRT----FLIGNFLIPTASMTPTLPVGDFIFV-----NKTAYGIRAETLIKVGEPKRGDIVVFHFPVNPNVDF-VKRVIGLPGDVISYKDKMLTINGKKL 178
5 -5.720IDP01932 gene: lepB-1; signal peptidase I [Coxiella burnetii RSA 493] CBU_1099 [Coxiella burnetii RSA 493]  ali follow..  12  28...........................................................................................RIKKIPIEKGTKPPLIIDYARSFFPILLIVLIIRS----FLFQPYRVPTGSLEPTIMPGDMILV-----NQYDYGLRVKKIVDVGEPKRGQIALFRWPVNPAATF-VKRVIGVPGDRISYQDKVFYINGKEM 153
6 -5.420IDP01608 gene: lepB-2; signal peptidase I [Coxiella burnetii RSA 493] CBU_1504 [Coxiella burnetii RSA 493]  ali follow..  10  28..............................................................................................KKRRSPKAKASLSIEYAKTFFPVLLIVWVVRS----FIIQPYHVPTGSLEPTVMPGDFIAV-----EQFAYGLRLKKILPISEPKRGQIALFRWPKDPKIVF-VKRVIGLPGDHIVYKNKRLYINGQEQ 150
7 -5.400IDP02578 gene: yafS; putative SAM-dependent methyltransferase [Salmonella typhimurium LT2] STM0262 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  8  2...............................................................................................KPARLSQTVVAPGCW-ALEQQLNPWFAKMYGFHLL-----IGNLSAEINSEACAVSHQVNVSSQGSPMQVLADPLHLPFADKSVDVCLLAHTLPWCTDPHRLLREADR-----------VLIDDGWLV 124
8 -5.330IDP00710 gene: spsB; signal peptidase IB SACOL0969 [Staphylococcus aureus subsp. aureus COL]  ali follow..  7  1...................................................................................................................MSKLKKEILEWIISIAVAFVILFIVGKF-TPYTIKGESMDPTLKDGERVAVNIVGYKTGGLEKGNVVVFHANKN-----DDYVKRVIGVPGDKVEYKNDTLYVNGKKQ 104
9 -5.260IDP91270 acetyltransf2, N-acetyltransferase [Bacillus anthracis str. Sterne] NT05BA3459 [Bacillus anthracis str. Sterne]  ali follow..  9  1......................................................................................................MTDFQKQFFARLNIEEKQKVSFEDLSNIMYAMAQTVPFENL--NVLEKNFK-----EISQENLKEKI-------------LVNNRGGLCYELNPTMYYFLKDAGFDVYLIATILKHHNE.. 118
10 -5.100IDP02386 Signal peptidase I [Bacillus anthracis str. `Ames Ancestor`] GBAA3086 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  17  10..............................................................................................................................GKYILFVFVLVVAYHSFTLCKVEGKSMQ---PTLYEEDYVNKAAVHFSDLEHGEIVIIKEEDE-----KYYVKRVIGLPGDVINITNGSVYVNDKKQ 101
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.