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Query: PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991;, from HGM_OVER

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MEGHEEVRTGWSRWDSLWPFLLFYCNFLKGVFLLRIAVVDGQGGGIGKHITARLRQELPPEVEILALGTNAAATVAMIKAGANEGATGERAIIYNAPRVEAITGSLAIILADAMLGELTPAMAAAIAASPARKFLLPINRSGVEVIGVTPEPLPHLIEALVNRVKFFYQEGGDKDLast
1 -7.320IDP06439 gene: A45L; A45L [Monkeypox virus Zaire-96-I-16] NP_536582 [Monkeypox virus Zaire-96-I-16]  ali follow..  14  1.................................MAVYAVTGGAGFLGRYIVKLLISA-DDVQEIRVIDIVEDPQPITSKVKVINYIQCDDKVREALDGVNLIIHTAALVDVFGKYTD-TQTILAACVDLGIKYLI........................................ 114
2 -6.890IDP01967 hydrogenase 1 maturation protease [Salmonella typhimurium LT2] STM1789 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  18  2...............................NAQRVVVMG-ADEGFGIRVAERLYARWPEEVEIVDGGTQGLNLLGYVEQ--------SHLLLLDAIDYGLAPGSLRTYAGEKIPAYLSAALADIRGHLPCHIALVGLQPALLDDYGGSSEIARSQLPAAEQAALAQLAAWGIV. 159
3 -6.880IDP91012 hypothetical protein y2259 [Yersinia pestis KIM 10] y2259 [Yersinia pestis KIM10+]  ali follow..  13  1......MYIGLPQWQLGLRDLADYSRY------FNCVEGNTTFYALRPEIVLRWRDMTPDSFRFCFKFPATISHQAALRDCDKELQAFYHCLAPLNDR----IGQLWLQLPAAFGPNELDRLWQFIDKLPAFQYGVEVRHPEFFAKGAAELALNQGLHQR............... 152
4 -6.790IDP01909 putative hydrogenase maturation protease [Salmonella typhimurium LT2] STM1536 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  16  1.................................MAEVTILGLGNGFGVRAAEKLFEQDNEKVDVVDGGTQGLALLPWLQQ--------EKLLIMDAIDFGMAPGSLAMFRDEQVPAYLTAALLQLTGGQLSEIVLIGVQPECLDDYGGSTPQVKAQLMPAVYLAQEVLAQWGIT. 157
5 -6.680IDP06313 hypothetical protein SP_1627 [Streptococcus pneumoniae TIGR4] NP_346067 [Streptococcus pneumoniae TIGR4]  ali follow..  13  1.................................MKLAVI-AANGQAGKAIV---EEAVKRGHEVTAIVRSENKSQAESIIKKDL-----ELTKDDLTGFDAVISAFGAYTPDTLHSKSIELFNQLLAGTQTRFLVV....................................... 97
6 -6.380IDP90732 gene: asd; aspartate-semialdehyde dehydrogenase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj1023c [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  14  2..............................SKKQKIAIV-GATGAVGEELLNVLDELDFPVESILPLASAKSVGSEVEFKGKAYKVKELTENVFKENPIDIAFFSAGGSVSEKYAKFAVESGAVVIDNTSHFRM......................................... 104
7 -6.290IDP02467 gene: asd-2; aspartate-semialdehyde dehydrogenase [Bacillus anthracis str. `Ames Ancestor`] GBAA3937 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  15  1...........................MEKQKTFHVAVV-GATGAVGEQMLNTLEKREFPIGKLTLLSSKRSAGKKLVFKGEEFTVQEATP--ESFEGVDIALFSAGGSVSKQLAPEAAKRGAIVVDNTSAFRM......................................... 104
8 -6.190IDP00208 putative dehydrogenase YPO1979 [Yersinia pestis CO92]  ali follow..  18  3....................................VLVTGATSGLGRNAAQWLLEA---GHEVYAIGRDQLAGEELRKLGADLTMTTMEVCQQWLKTCDVVWHCAAKSAPWGNPQDFTHKLAQAAGREGVKRFI........................................ 110
9 -6.090IDP02656 short chain dehydrogenase [Francisella tularensis subsp. tularensis SCHU S4] FTT0558 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  12  1.................................MKRIIVFGATGTIGRATTQSLKNA----YEIVTVSFSGDKTDFAVDIQDSQSI---KSLFDKIGNFDALISTTGKVAFKNITAIEQQDWNLSL................................................. 87
10 -5.970IDP00701 gene: cap5N; capsular polysaccharide biosynthesis protein Cap5N SACOL0149 [Staphylococcus aureus subsp. aureus COL]  ali follow..  14  1................................MRKNILITGVHGYIGNALKDKLIEQ----------GHQVDQINVRNQLWKSTSFKDYDVLIHTAALVHNNSPQARLSDYMQVNMLLTKQLAQKAKAEDVKQFIF....................................... 94

FFAS is supported by the NIH grant R01-GM087218-01
1 3 7 7 9 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Sikora S, Godzik A. Combination of multiple alignment analysis and surface mapping paves a way for a detailed pathway reconstruction--the case of VHL (von Hippel-Lindau) protein and angiogenesis regulatory pathway. Protein Sci. 2004 Mar;13(3):786-96. Epub 2004 Feb 06.