current user: public |
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Query: PB013946 A7ABR4_9PORP/121-442 PB013946; Pfam-B_13946;, from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 | |||||||
# | Score | Template | Links and tools | %id | First | RFYCHEVVQRWISPDGKVTDMALLRGFLFCYCDVWALGSDMEVRPHNSLYDDVVARSCAYPKMRILPQLRRNGFKGDFHGISPVRLFKALLSDPRIETLMKGGEIEVMKHFLFNTRTADECWASYLIAKRHKYQIDNLSMWCDYLRMLKKLGQDLRNPKNICPEDFMAAHDNATRKIEAIHEKERAAEQRRWEIERREREQQRQLQRKKDAEDFIANKSKFFGLVITDEEIIVKVLESIDEYYNEGKTQGICVFGSGYYKKADTLILSARIGDEIIETVEVDLRTLEVVQCHGKHNQDTEYHERIIDLVNKNANLIRERMKA | Last |
1 | -6.580 | IDP05430 hypothetical protein lmo1265 [Listeria monocytogenes EGD-e] lmo1265 [Listeria monocytogenes EGD-e] | ali follow.. | 11 | 65 | ...................................................................................................................................................................DNLEKDAPIIIK--TKKSEKTTVTKETKENVFPTDFYTMSDVQINSIEKDTTGKLS-------ENMTIKVLEYSVENV--VEGEEYDLTIDGYKNMEKGEEYTLFLEKNPDGDNYIKFPVEELSEEELFLDGGQATEETDSIEEIYQEVYQEVLEEYS. | 220 |
2 | -6.270 | IDP05379 gene: cccB; cytochrome c-551 [Bacillus anthracis str. Ames] BA_5417 [Bacillus anthracis str. Ames] | ali follow.. | 6 | 28 | ..........................................................................................................................................................................................................................................KPSKQSASTDSAEQIKSCIGCHAKDLSGAT--------GPDLRKVGQKYDAADIEKIKGRGSMSP--QGEDAKKVAEWLAEHK..... | 107 |
3 | -6.030 | IDP06329 58 kDa phosphoprotein, putative [Toxoplasma gondii VEG] EEE34668 [Toxoplasma gondii VEG] | ali follow.. | 8 | 7 | .......................................................................................................................................QKVAELKAFIGMCERDPSILHRPELSFFKEYLQSLKAAIPAERQAGAGSPDRPTTSPVPEASSDDSSLESEVEEFDEESLKDSEVIPPET-GEKELTDDELDKLGKLKEEASAAERALEKYTEYTRRADVLLKLKRPVACIRALKLNPDSARAYKIRGKANRLLGKWREAHSDLDMGQK........ | 214 |
4 | -5.890 | IDP05473 hypothetical protein BA_2626 [Bacillus anthracis str. Ames] BA_2626 [Bacillus anthracis str. Ames] | ali follow.. | 12 | 61 | ............................................................................................................................................................................................................................................ASPAQAGNMKSWMCNCLGRWGYL--RRNGVSGYTWQGGRRRKVSYRYQQISNYMCFA............................. | 134 |
5 | -5.820 | IDP93848 lipoprotein [Yersinia enterocolitica subsp. enterocolitica 8081] YP_001005557 [Yersinia enterocolitica subsp. enterocolitica 8081] | ali follow.. | 16 | 84 | ..................................................................................................................................................................................................................................QTGRFNVLERTNMEELKNEAAISGK-VTEFGRKETGDRQLFGIGKSQVAYAKVNVNVNTSEVVFSSQGAGESTLNGKVLDLAIREAVNNLVAGIES | 216 |
6 | -5.750 | IDP00840 HIT family protein SACOL1894 [Staphylococcus aureus subsp. aureus COL] | ali follow.. | 6 | 1 | ........................................................................................................................................................................................................................................................MSETI--FGKILTGEIPSFKVYEDDYVYAFLDISQKGHTLLIPKKASANIFETDEETMKHIGAALPKVANAIKR | 74 |
7 | -5.740 | IDP06006 Hsp70 interacting protein [Toxoplasma gondii] ABG75606 [Toxoplasma gondii] | ali follow.. | 8 | 7 | .......................................................................................................................................QKVAELKAFIGMCERDPSILHRPELSFFKEYLQSLKAAIPAERQAGAGSPDRPTTSPVPEASSDDSSLESEVEEFDEESLKDSEVIPPET-GEKELTDDELDKLGKLKEEASAAERALEKYTEYTRRADVLLKLKRPVACIRALKLNPDSARAYKIRGKANKLLGKWREAHSDLDMGQK........ | 214 |
8 | -5.710 | IDP04251 gene: virS; sensor histidine kinase VirS [Clostridium perfringens ATCC 13124] CPF_1751 [Clostridium perfringens ATCC 13124] | ali follow.. | 10 | 213 | .....................................................................................................................VSKIIKNNKLKLENEFIKDKLEMEYKYYSNLKDNQEKVK----------RLYHD-IKNHIACIEGNNKETGIRKKYIDSLNSEIDKLNLGFNTGNEVLDVILNNKREKCMENNISLKV--EYFDICT-SNCIDNAIEACKKIKDNNRYISLKGNCVNNFYVIKIEKLNGDFLTDKKDKFLHGIGLKNIRLALEKYNGEIIIEPLD | 423 |
9 | -5.690 | IDP90295 dual-specificity phosphatase laforin, putative [Toxoplasma gondii ME49] TGME49_005290 [Toxoplasma gondii ME49] | ali follow.. | 11 | 354 | ...............................................................................................................................................FVGSCPRQLKHKEELKVTCVVNLQTEQDLCNNYPDPIASSRSAEAVSQLYDGSGLRYVWLPTADMCDSARKIAVAN---------------AAFLLLGLFQSGHSV-HCNAGVGRSVA--AFLCFAVGLDLRKVNFLICARRPVAYWDEKAMKYGIGDYQAKFGHCRVVGEEAEERQHA | 523 |
10 | -5.490 | IDP95283 hypothetical protein A1S_0137 [Acinetobacter baumannii ATCC 17978] YP_001083224 [Acinetobacter baumannii ATCC 17978] | ali follow.. | 10 | 100 | ............................................................................................................................................................................................................................................................VRSYTDPDQADARRAEIILNGLSADVIKSSENGKTWYRVIGPYDTQEAALAAQQTLQHSGIDSIVIKRK. | 169 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Shiryaev SA, Ratnikov BI, Chekanov AV, Sikora S, Rozanov DV, Godzik A,Wang J, Smith JW, Huang Z, Lindberg I, Samuel MA, Diamond MS, Strongin AY. Cleavage targets and the D-arginine-based inhibitors of the West Nile virus NS3 processing proteinase. Biochem J. 2006 Jan 15;393(Pt 2):503-11. |