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Query: PB017124 _Gut.Meta.Jp.0039711_ gi|162659581|dbj|BAAX01000024.1||2 (+ 385:1498~0 complete), from HGM_OVER

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst ASAQAKQTVKVLEYCPAPGQFTNKLPEINNTMSAEERLKACEEQLEDGNLVCLGAAGGYITVALDQPIKNGKGSDIRILGNAFYSANDPKYGDATIGGSVEPGIVYVGVGSSPETAEWYELAGSEYYTTEMHRFEITYYKPTVETGEIKTPYITIDNYIRWTASWTNPDGSKQTAEGWQPKNVYHKQSYWPAWEENDQITFRGARLPDNAVNYGGDGSDPDNPQYWVSYRYAADSYGYADAAPNSDNVYTTFDLDWAVDSDGNPKHLDHADFIRIQSGVLQQCGWTGETSTEVGRITNLast
1 -7.310IDP02409 hypothetical protein Cj0883c [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0883c [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  13  4.TKASEYALLSLIYISQKETPQDVDSLALELDIPKSFLAKILQTLAKDGLLK-GAKGGFVLYTIKEIVNSAEKKDISVFE.......................................................................................................................................................................................................................... 90
2 -6.230IDP06477 gene: A13L; A13L [Monkeypox virus Zaire-96-I-16] NP_536550 [Monkeypox virus Zaire-96-I-16]  ali follow..  22  109............................................................................................................................................................................................................................................................QIVQAVTNAGK------IVYGTVRDGQLEVRGMVGEINHDLLGIES 148
3 -5.570IDP05172 conserved domain protein [Bacillus anthracis str. Ames] BA_2271 [Bacillus anthracis str. Ames]  ali follow..  8  32SVTAPYNKNQIAEWLEMHAKPLKTTNPNAPFND----LKPFKNMVGSASIVGLGE-GAHEVFTMKNRIVSEKGFTNLVLEEGWDRALELDQYVLTGEGNPSQHLSPVFKTKEMLDLL-YNANPKHKSKVRIIGMDIQSVNENVYNNIIEYVKRTNSKLVPRIEEKIKGLIPVTKDMNTFESLTKEEKEKYISDAKQISAVLEENKSYLNGKSKEFAWIKQNARIIEQFTTMLTSPPDKPSDLFLKHDIAMYENAKWTEEHLGKTIVWGHNGHVKTNMLPFVYPKVAGQYLAEYYG... 333
4 -4.700IDP05465 conserved hypothetical protein [Bacillus anthracis str. Ames] BA_1580 [Bacillus anthracis str. Ames]  ali follow..  20  122..................................................................................................................................................................................................................................................................NSDGN------YDVNKMMNTAGQMMNAMNQVTGIVKQVGG 155
5 -4.590IDP05246 hypothetical protein lmo2439 [Listeria monocytogenes EGD-e] lmo2439 [Listeria monocytogenes EGD-e]  ali follow..  11  59................................................................................................................................................................................................................................................................AYDEAGKETEVT--AYLKLYIKEDKGVTSYEEVPEK...... 102
6 -4.530IDP05702 hypothetical protein lmo2568 [Listeria monocytogenes EGD-e] lmo2568 [Listeria monocytogenes EGD-e]  ali follow..  13  58................................................................................................................................................................................................................................................................CLDNQGNSHKVN--KQYKIVVQDNELLVQAKEINSV...... 101
7 -4.500IDP00970 gene: tpx; thiol peroxidase STM1682 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  10  1.......MSQTVHFQGNPVTVANVIPQAGSKAQAFTLVA------KDLSDVSLSQYAGKRKVLNIFPSIDTGVCAASVRK------------NQLATEVENTVVLCVSADLPFAQSRFCGAEGLSNVITLSTLRNNEFLKNYGVEIVDGPLKGLAARAVIVLDENDNV.................................................................................................................................. 144
8 -4.420IDP05579 amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Ames] BA_0855 [Bacillus anthracis str. Ames]  ali follow..  11  22............................GKEEKKDTASQDALQKIKQSGELVIGTEGTYPPFTFHDSSNKLTGFDVELAE------------EVAKRLGVKPVFKETQWDSLGLDAKRFDMVANEVGIREDRQKKYDFSKPYVSSSAALVIAKDKDKPATFADVKGLKGAQSLTSNYADIAKKNGAEIIGVEGFSQAAELLASFTINDKLSVLNYLETKKDAKIKIVDTEKEASESGFLFRKGSTKLVQEVDKALEDMKKDGTYDKI--------------TKKWFGENVSK...... 265
9 -4.400IDP90654 gene: ribF; bifunctional riboflavin kinase/FMN adenylyltransferase [Yersinia pestis CO92] YPO0474 [Yersinia pestis CO92]  ali follow..  8  15..............................................HGCVLTIGNFDGVMVMIFEPKYLAQAGVDYLLFDPRFAANTAQAFVAQLLVEKLGVKFLTVGDD---------RQGDFQLLQQAGAEFGFDVISTDSFCDGGLRISSTAIRQALHDDDLVLAETLLGHPYSISGRVVHGDELGRTIGFPTANLPLKRLVAPVKGVYAVDVYGLGSTPL------YGVANIGTRPTVAGVRQQLEVHLLDVTMDLYGCHIDVVLRAKLRNEQRFASLEALKQQIANDVVTART 304
10 -4.350IDP05514 gene: ribC; riboflavin biosynthesis protein [Clostridium difficile 630] CD1315 [Peptoclostridium difficile 630]  ali follow..  9  14..............................................KESVITIGNFDGSIVFTFANKLLEDLGIDIVVFDEYMTKIPAKDFVDEILVKKLKAKKIVIGHD---------KEGNVNLLKSLEHEFGFEVEVIKPIKINDVRVSSTYIRSLVSQGDMANVKEYLGRNYKLEGCVIHSKHLGRTIGFPTANIDLKNNMLVPK------RGIYASIVHIGDETYFGATNVGYNPTVNGKTLSIETNILEFDRDIYGENIIVEFLERIRDERKFNSIDDLKNQLYNDTNYVYE 302
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.