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Query: PB019279 Q5LE73_BACFN/1-147 PB019279; Pfam-B_19279;, from HGM_OVER

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKTLTFKYLKLFLLAVAMINLTSCEIEIDDFYDDDNIGGSYYNKSLDLCSRPWADTFYDADGNYCYQELNFYLDRHGEDYIRVEYPNGRYSESVYSFTWNWEDRSQYSLRMVYGPGDVSYLDDVWIRGNVLSGYLDGHDNYVDFTGVLast
1 -15.900IDP05580 putative lipoprotein [Bacillus anthracis str. Ames] BA_0936 [Bacillus anthracis str. Ames]  ali follow..  14  2LK----KLGILVLGSAVALSLVACGDSTKEASNEKKEEPKQEAKKENKENKESKKKITAADVEAIKEKYEDVVAKFGEPDNKAESQAGDIKMIIASWTKNVNGDLGANFNVTFTEKDGQK........................... 127
2 -13.400IDP05503 putative lipoprotein [Bacillus anthracis str. Ames] BA_4863 [Bacillus anthracis str. Ames]  ali follow..  10  1MK-------RALFFFISIFFLGSCSIWYVTFSSESKS---------------WTGQYKKDDSEDGMFTFRYKGGDGNTEFKNLEIAINGSKDEPIEIVIKWDDKYEEKMVLK................................... 122
3 -11.700IDP05670 hypothetical protein lmo0617 [Listeria monocytogenes EGD-e] lmo0617 [Listeria monocytogenes EGD-e]  ali follow..  18  1MKKLK-SILLLMGIITFALALTACGGTEDKASTEKIETAKAETKKKS-------NPNELGDYKVEILSSEVVKDFEGNNAIAIKTKFTNNSKENISFM................................................. 90
4 -11.100IDP05485 putative lipoprotein [Bacillus anthracis str. Ames] BA_3234 [Bacillus anthracis str. Ames]  ali follow..  1MNMKGRNVS-VVFIAIVIFIIAGCSNMIGQTIKVQKHVDDTYEDLKVVTDNKQVQQVKKILNDAHFENKKVQMSRPADYHFVFQFKNPKIEAKATLYQ--WVIPNKDKIEIIAGNSQYVQLEG---NAATLFQIITGEKLV...... 140
5 -11.100IDP05554 hypothetical protein CD3669 [Clostridium difficile 630] CD3669 [Peptoclostridium difficile 630]  ali follow..  1MKNKK--IMLVLSILSISIFAVGCTNAQNGSDSSKKETKSNTNVEQPKEENN-NKAKPTPKEETKAQSATIYSFDVDKTDLIENKVDLNKIDENTLFE---DIDGVKTGILDVSSAETLMLDSV----RTYIKNMNVEQIKITVDG. 174
6 -11.100IDP91374 outermembrane lipoprotein [Vibrio vulnificus CMCP6] VV1_1919 [Vibrio vulnificus CMCP6]  ali follow..  16  1MK-------NIGLLLLASLFLAGCTTPTHLPLSGSQAIEIRIDDQFNPKHCQYLGTVTGNEGQGAVNDLKNNAKELDADTIFVIAPQ............................................................ 94
7 -11.100IDP05460 putative lipoprotein [Bacillus anthracis str. Ames] BA_0985 [Bacillus anthracis str. Ames]  ali follow..  1MK----KIISICALTALSFTLIGCASTSATDKSPQAKQEHKQNAFQLNSANITDIEILQTTNNTTSKSQTDNKE----MIQSIVSAVQKGTPKTITLDQKKRKSAHSTITVTYKDDAKEEF-LVWVDNKEQITIA............ 126
8 -11.000IDP05508 putative lipoprotein [Bacillus anthracis str. Ames] BA_5398 [Bacillus anthracis str. Ames]  ali follow..  1MTIRKR----TSFIWIFLFSLVACSPPNTTIDKKNDVVVKGTGISNLDKFEQFVLNVEQVEGDPIFQTLERSKNDILYASDNRKDQFDGDNKGLYKDSCKSIVKDERESGTTY.................................. 121
9 -10.900IDP02678 hypothetical protein FTT1653 [Francisella tularensis subsp. tularensis SCHU S4] FTT1653 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  10  1MKKLSKLLLRMLITILVTIIVAGCASDSNTRYENGYYIAELNYNFNDVYQATINSISSGITYDENGHVYNLLENSEINNKATITAVNNEDPKDRLEIIIFKISKNNTKIMIKYA-GDSIRSSALL---DTINESL............ 135
10 -10.800IDP02585 lipoprotein [Francisella tularensis subsp. tularensis SCHU S4] FTT1416c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  10  1MKGLK-AKIYIIFLAAVLAVISGCATDKGTQYKDGYYITTLNYNFNTVYNATLQAIQNGQTFDYKSNPYDISVNKNNGTDAEIVSASDSDSTDSLQVAMKKLPNNATRISIKYG-GNSIRSSALI---GIIEGNIRYANT....... 137
11 -10.700IDP05437 putative lipoprotein [Bacillus anthracis str. Ames] BA_2898 [Bacillus anthracis str. Ames]  ali follow..  15  1MKKV------LLIIPLFIILLSGCSNND--------------------IYGSW--EVVDNKNGLCPISYKFETVVKKIIQYLVEMQTTKKKEDLYKGSFVKDSNVYH---IDYG-NSFTSDQTLQVVDGKLNVYFYAVEKLCTYK.. 118
12 -10.700IDP05267 hypothetical protein lmo0255 [Listeria monocytogenes EGD-e] lmo0255 [Listeria monocytogenes EGD-e]  ali follow..  11  1MK----KFLSILSILVLALLVTACGSDSSDKKSAKKEEKMETVTYIADINGAKLEATFSHVGDNLRKVYPLTALGLESGANLDDATKKQLEEQVASQYSAYKESKGASLETKFTDEALELVDLYKADKDSVA-SLKETVKQFEAQGF 162
13 -10.500IDP06193 gene: lpp20; lipoprotein [Helicobacter pylori J99] NP_224067 [Helicobacter pylori J99]  ali follow..  1..MKNQVKKILGMSVVAAMVIVGCSHAPKSGISKSNKAYKEATKGA-----DWVVGDLEKVAKYEKYSGVFLGRAEDLDYSTNQATAKARANLAANLKSTLQKDLENEKTRTVDASGKRSISGTDKISQLVDKELIASKMLARYVG. 148
14 -10.400IDP02672 hypothetical protein FTT1602 [Francisella tularensis subsp. tularensis SCHU S4] FTT1602 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  15  1MK----KQLFAISITTALLVLSACGQTGPLYLPDEDKLNSGSTLAKSGSSIMVKQNQQNNSTSTSDNQ............................................................................... 64
15 -10.300IDP05588 putative lipoprotein [Bacillus anthracis str. Ames] BA_2883 [Bacillus anthracis str. Ames]  ali follow..  17  1MK-VYVKIALLCLTFTCIFALAACKGTDEKKETNPTSENSKNEQNTS.................................................................................................... 46
16 -10.100IDP05483 putative lipoprotein [Bacillus anthracis str. Ames] BA_3005 [Bacillus anthracis str. Ames]  ali follow..  14  1MR----RMLLIIISAIAAFALAACTGNKVDESTSKNFISKAEEIVSLLNEAKY-KEVHEKFDSKMTAALSEEK----KDLTPIIEKAGTFEKIEKQSIEEKDGLYTVILVAKYSKEQITYNDKEEIAGLVIK............... 128
17 -10.000IDP04063 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_0514 [Clostridium perfringens ATCC 13124]  ali follow..  10  1MNKRKI-VASILTTSLLVTSLVGCVGSNNKANTSSNDSKVQESVENQSDFNDLRTYVGKTYNEVSE--------GTGNENIEEVAGKKVIVSSSYSTRM----NYNANLILELDDSKNISAVSVHFKGIEPENILE........... 126
18 -10.000IDP04197 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_2510 [Clostridium perfringens ATCC 13124]  ali follow..  1MK---KLLVPVLVIIIFALLFVGCTNSSNSSSDSSVEIINSNQQNSNSNNNNSSNNDTKKSDSNNASHKDNKDNNVSNNKNTNKKLDNKAEKLLKDIKEKAVKGEIIDYDFKLGDSIYDVIDKL....................... 121
19 -9.950IDP05476 putative lipoprotein [Bacillus anthracis str. Ames] BA_2745 [Bacillus anthracis str. Ames]  ali follow..  11  1MK----KSTLILCSLCLGFSMTACEQKKEVKKQTATSSTVMENQKKESININHFSNI--NEGMTYKEVKDL----IGFEDLLIEEGVEHSTQIKQIFAWK-GSNPTALVEITFLDGKVHSKVQQGLS.................... 117
20 -9.930IDP05442 putative lipoprotein [Bacillus anthracis str. Ames] BA_0171 [Bacillus anthracis str. Ames]  ali follow..  1MSKKLLSL--FSAVIVAAFVITGCGQSDTTNKEQKENAAKENKTEKTDTTKENKPEEKNPKTRKLKIKRRKIPLLAPAIILNLFPTWKKKQAEKQKFFLKIRNHKSINLKMQY.................................. 112
21 -9.910IDP05607 putative lipoprotein [Bacillus anthracis str. Ames] BA_4862 [Bacillus anthracis str. Ames]  ali follow..  17  1MDRHMKFSM-FMFLGVVLIILAACTTKSVEQVAVKE............................................................................................................... 35
22 -9.870IDP05451 putative lipoprotein [Bacillus anthracis str. Ames] BA_0580 [Bacillus anthracis str. Ames]  ali follow..  10  1MK-------KIGTMLLFSILIAGCTQAQPDLKKPKKEAIATSSTQVNAPSFFHLSVLKDVNWEETPSFIQEKIPLKGIEEKIAMADSPIIANEKNEIMWYFLDPEMPTGKLS................................... 105
23 -9.710IDP05658 hypothetical protein lmo0207 [Listeria monocytogenes EGD-e] lmo0207 [Listeria monocytogenes EGD-e]  ali follow..  10  1MKMLK-KGTAVLFVMIMAVMLVACGDKEETKTNGVDSKLTYTYKGDKVTKQTAENTMSEDAEKMLKATSDKFQGIDGLKEKIEYK----------------DDKAIETLEVDYTKISSEDMNKI--TSKGIS--MEESAKMLESQGY 148
24 -9.680IDP04392 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_1500 [Clostridium perfringens ATCC 13124]  ali follow..  1MR----VLKGVILAIIPAFLFMGCGEFSKNDVAKVSFEKLSEKEEQIL-----VKNISKNKGYRIDLNYEVYKEGKEVKN................................................................... 82
25 -9.650IDP05009 putative lipoprotein [Bacillus anthracis str. Ames] BA_4237 [Bacillus anthracis str. Ames]  ali follow..  16  1MK----AWKSIFVLCSFLLMLSGCFHQEEKKVEPKKKESIPETKEYG.................................................................................................... 43
26 -9.630IDP04058 ABC transporter, solute-binding protein [Clostridium perfringens ATCC 13124] CPF_0556 [Clostridium perfringens ATCC 13124]  ali follow..  12  1MKRKLVKMLTVACVTAIAASFVGCGNKEEAPKDNEKP----------------STEQAEGSGEKKVLEIAVFEGGFGKDYWDACIDAFEAEHPDVEVKMEANPKIGDIIRPKLSSENTP--DFIYLSTNDQSGIAN----ALIKDKA 126
27 -9.520IDP05677 hypothetical protein lmo1068 [Listeria monocytogenes EGD-e] lmo1068 [Listeria monocytogenes EGD-e]  ali follow..  1MK----KWMVIISIISLVALLGACGNNDNEKDQEDKSTTDSTTKKAKSSSNESNKAAETKENDTNDKAATTDKGSSNPTKEEKDTSTTTDTPKKET................................................... 92
28 -9.500IDP93899 hypothetical protein YE3559 [Yersinia enterocolitica subsp. enterocolitica 8081] YP_001007717 [Yersinia enterocolitica subsp. enterocolitica 8081]  ali follow..  10  1MKNTHKKSYSYYLILILSLVLSGCTLPTDN---------SHNYNGGYIQGNILSNSKTIPENVKITLSLQNKASGEKEYMLHEYSFMTKTKSLTIPFRLQLPNELSL------SSQPLNISVRVEKEGKLI................ 120
29 -9.450IDP91953 extracellular solute-binding lipoprotein [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100002215 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  11  1MKFRK--LACTVLASAAVLGLAACGNSGGSKDAGKSGGDGAKTEITWWAFPVFTQEKTGDGVGTYEKSI----------IEAFEKANPDVKVKLETIDF---KSGPEKITTAIEAGDVLFDAPGRIIQYGKNGKLAELNDLFTDD.. 133
30 -9.350IDP93894 lipoprotein [Yersinia enterocolitica subsp. enterocolitica 8081] YP_001005558 [Yersinia enterocolitica subsp. enterocolitica 8081]  ali follow..  14  1MKL-----TQKISLLLAASVLAGCATAPKPIYHWDNYQSTVYEY-KESIEKSRAQGLPVPPGLHAHLGMLYGNTGHTDLAMTEFNTEKSAFPESTPF.................................................. 105
31 -9.210IDP05763 hypothetical protein lmo2331 [Listeria monocytogenes EGD-e] lmo2331 [Listeria monocytogenes EGD-e]  ali follow..  20  1MK--KGIALLAGFMLAFSIFLTGCGGTDNTRKENHSDGSAEVKNKKD.................................................................................................... 45
32 -9.140IDP05592 putative lipoprotein [Bacillus anthracis str. Ames] BA_3194 [Bacillus anthracis str. Ames]  ali follow..  1MK----ILKFGIIGALSITLLIGCTSNSNETKASNKEASTAVKEKEIVYENVMFEQKEVRKLEISPVNSKSSNQVVNTENIKTIFT-ESAEKKTLLLDQEAKNYIHSKMKVTYQDNSIQEF-FVWIESD.................. 125

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 5 5 2   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Lesley SA, Kuhn P, Godzik A., Deacon AM, Mathews I, Kreusch A, Spraggon G, Klock HE, McMullan D, Shin T, Vincent J, Robb A, Brinen LS, Miller MD, McPhillips TM, Miller MA, Scheibe D, Canaves JM, Guda C, Jaroszewski L, Selby TL, Elsliger MA, Wooley J, Taylor SS, Hodgson KO, Wilson IA, Schultz PG, Stevens RC. Structural genomics of the Thermotoga maritima proteome implemented in a high-throughput structure determination pipeline. Proc Natl Acad Sci U S A. 2002 Sep 3;99(18):11664-9. Epub 2002 Aug 22.