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Query: PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;, from HGM_OVER

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKREAQNYIDNKLKPPKAFFEWCFSQIPTYKWSNKKETILASNRKNCSVIEQKLRKNSRLTFFGKLNVFGIVLVTSKRIEIQSYAFWNRVVEGKEIIEFDLVNFEQFAEGEHVKVASSDGKMWFGLIPVYGGMSGGPYSMIQLFENDWKEKIRSKSELKYLEIPHLDFKEIETIYKYRVEIEFLQKIKARQLAKEVMYPVTQYTNGSFRKTVDMRTINSKWLKENKPFFKNSDRGFMEFELARRIQKRRGKVVSGIEKYLDYRAINKIPEGVGIVRFQNWIIKNKVDFSYYLDYLNLMRDLNIAIDSENIIMPKNLVIAHDNAVKLLYQMKHEVEEQQYKVRFEKIKDLEKTIDNYAFIVPKQASDLLTEGKALSHCVGGSNYIKQHIEGKTTIIFVRDKQDLEKSLYTLEYKNGQIYQLRGKHNCDPTKDVQMAANKWAKLLKSKTKVLQNLast
1 -5.910IDP90278 hypothetical protein, conserved [Toxoplasma gondii ME49] TGME49_003450 [Toxoplasma gondii ME49]  ali follow..  6  95.............................................................................................................................................................................................................................................................................................................................DNEHLLRSGYIARRPNELPVLTRWFPMSYAKDALMPAAFLDLILYSREQIAKETAAE----SNTAVVIDPNAPAWSIIAVKQNEKYSLPMAPITMLRNTLIEEGGSGVALDREAYKASVAYWKTHAIVMDKESS. 225
2 -5.620IDP90219 gene: m008L; m008L, m8 MYXV_gp011 [Myxoma virus (strain Lausanne)]  ali follow..  9  2.....................................................................................................................................................................................................................................................................................................MSYPLYKLFLKLCDVEIVAEGKSIRAHRLVLSAYSKYFYNLFNGNFLEKNVDVIDLEADYKTVFDVIKGNTESIFSLVHYLENCIRAELYDLSELKRRARWLMPSLVMNEKDRLREMSLDDLSLM-LVQIRNTVDRSIALSAITEWIQTNVRERRR... 192
3 -5.600IDP90183 gene: CPXV035 CDS; CPXV035 protein AAM13482.1 [Cowpox virus (Brighton Red)]  ali follow..  7  1..................................................................................................................................................................................................................................................................................................MESVTFSIN--GEIIQVNKEIITASPYNFFKRIQDHHLKDEAIILNGINYHAFESLLDYMRW-KKINITI-NNVEMILVAAVIIDNCIRMFNFSKKYLYNASMSEIINNITAVTSDPEFGKLSKDELTTILSHEDVNVNHETAMILLKWIHKNPNDVDIIN. 182
4 -5.500IDP91673 CD44_HUMAN [Homo sapiens]  ali follow..  12  655............................................................................................................................................................................................................................................................................................................................................................................ASLLALALILAVCIAVNS--RRCGQKKKLV--INSGNG--------AVEDRKPSGLNGEASK--SQEMVHLVNK--ESSEMTADETRN 732
5 -5.450IDP90171 gene: CPXV013 CDS; CPXV013 protein AAM13460.1 [Cowpox virus (Brighton Red)]  ali follow..  12  1........................................................................................................................................................................................................................................................................................................MEEYVNIILGDQVLTSDKKLLCSYSFFKNRFEFDDTTDINLTSYDNHDLIKKLMFINTNELDIDEDNVQDMLVLADSLNNCLDIITYAAFYLKLAAINTTATNFTHVVKDDTFISLPFDIISSIFENDDLDTKSEAMDALCIWMKGDTERINMVKE 182
6 -5.440IDP90215 gene: m006L; m006L, m6 MYXV_gp009 [Myxoma virus (strain Lausanne)]  ali follow..  8  24......................................................................................................................................................................................................................................................................................TSFTAHRLILSVHSDYFYRL------FNGSFEVPDTITLDTDDGVLRTVLRYMYTGYSNIRDRTVEDLQSIIVLADYLGITKLVKEADYMVSRVDPTNCVSAFQFAETYLKRNLNTFLPELLLNSRGAFTKLDTDE--VVVLRASYEIVDRRFVLKAILDWVRKGPKRIERIKT 195
7 -5.380IDP90295 dual-specificity phosphatase laforin, putative [Toxoplasma gondii ME49] TGME49_005290 [Toxoplasma gondii ME49]  ali follow..  10  363...................................................................................................................................................................................................................................................................................................KHIRHLKEELKVTCVVNLQTEQDLCNNYPDPIASSRSAEAVSQLYDGSGLRYVWLPTADMCDSARKIAVANAALGLFQSGHSV-HCNAGVG-----RSVAAACAFLCFAVG-----LDLRKVNFLICARR---DEKAMKYGIGDYQAKFGHCRVVGEEAEE 519
8 -5.360IDP04514 putative spore-cortex-lytic enzyme [Clostridium perfringens ATCC 13124] CPF_2662 [Clostridium perfringens ATCC 13124]  ali follow..  17  80..........................................................................................................................................................................................................................................................................................................................................................................TKDDI--------YLMSQVVYAES-FDGKIAVVILNRTTDSQFPDTIHGV----ITQRNGKIDVVPDGDSYNAVLKWMKGVEKTGEKS.. 190
9 -5.360IDP92710 peptidoglycan associated lipoprotein OprL precursor [Pseudomonas aeruginosa PAO1] NP_249664 [Pseudomonas aeruginosa PAO1]  ali follow..  18  93.........................................................................................................................................................................................................................................................................................................................................................................GSGQRVVLEG----HT-GTREY--NMALGE------RRAKAVQRYLVLQGVSPAQL-ELVSYGKERPVATGHD--QSWAQNRRVELKK... 168
10 -5.300IDP93848 lipoprotein [Yersinia enterocolitica subsp. enterocolitica 8081] YP_001005557 [Yersinia enterocolitica subsp. enterocolitica 8081]  ali follow..  7  84...............................................................................................................................................................................................................................................................................................................................................................QTGRFNVLERTNMEELKNEQQLKG--TGDVTEFGRKETGDRQLFGILGRGKSQVAYAKVNLNTSEVVFSSSYDSTLNGKVLDLAIREAVNNLVAGIESG.. 217
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Godzik A., Rychlewski L. A support vector machine approach to the identification of phosphorylation sites. Cell Mol Biol Lett. 2005;10(1):73-89.