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Query: PB045072 _Gut.Meta.Jp.0111663_ gi|163310555|dbj|BABD01000145.1||3 (+ 1662:2028~0 complete), from HGM_OVER

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MRKLGFTLVAALAFSVSAFANNANDTINVAGKWDGTINKAKLTKYLQLSSQQNEQVASICDYFQEQMKVANSSKKNSDQKVRNAVYGNLKLMKNTLTEKQYSDYLRLMALTLRNKGIDLast
1 -20.900IDP02058 gene: cpxP; periplasmic stress adaptor protein CpxP [Yersinia pestis CO92] YPO0075 [Yersinia pestis CO92]  ali follow..  13  1MRKVTTLVMASMFVLGSSAAEGYHGDGKMMMNKKGDRGHHNMFDGINLTEQQRQQMRDLMRQSHQSQPRLDLEDREAQIERHVEMAKVRNQMYNLLTPEQKEALNKKHQERIEKLQ.. 150
2 -16.000IDP01826 gene: zraP; zinc resistance protein [Salmonella typhimurium LT2] STM4172 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  12  1MKRNNKSAIALIALSLLALSSGAAFAGHHWGNNDGM----WQQGGSPLTTEQQATAQKIYDDYYTQTSALRQQLISKRYEYNALLTASSVAMAQAGIPRGAGMGYGGCGGYGGGYH.. 140
3 -10.600IDP05407 conserved domain protein [Bacillus anthracis str. Ames] BA_1485 [Bacillus anthracis str. Ames]  ali follow..  16  1MKNLVIGLVALLFVVVGGFYIKKYQETTETVGDVQEVKWEKADIVFQLLNNKSSEV-----------------------------RGVNDQIRAVIVDGQLKHVQQTKPTFAGN.... 93
4 -10.400IDP91374 outermembrane lipoprotein [Vibrio vulnificus CMCP6] VV1_1919 [Vibrio vulnificus CMCP6]  ali follow..  12  1MKNIGLLLLASLFLAGCTTPTHLPLSGSQAIE---------IRIDDQFNPKHCQYLGTVTGNEGHWYSYLFFSNDTMMQGAVNDLKNNAKELDTIFVIAP.................. 93
5 -10.200IDP05677 hypothetical protein lmo1068 [Listeria monocytogenes EGD-e] lmo1068 [Listeria monocytogenes EGD-e]  ali follow..  12  1MKKWVIISIISLVALLGACGNNDNEKDQEDKSTTDSTTKKAKSSSNESNKAAETKENDTNDKAATTDKGSSNPTKEEKDTSTTTDTPKKETPKSPAKTEAFSF............... 104
6 -10.000IDP05148 putative lipoprotein [Bacillus anthracis str. Ames] BA_0177 [Bacillus anthracis str. Ames]  ali follow..  16  1MKKIIFVSSLVLAISLGVGCSNEKTAKTDEPKKESVQKEKELTAKFKKTNEAFKNEEHVTMTYGVGVK.................................................. 70
7 -9.910IDP05275 hypothetical protein lmo2686 [Listeria monocytogenes EGD-e] lmo2686 [Listeria monocytogenes EGD-e]  ali follow..  12  1MKEFLFFAVFTFIMTIGVGVINASASEIENPDNIQEAEVETF--DLNGNIAQEKEI.............................................................. 54
8 -9.740IDP06510 WxL domain surface protein [Enterococcus faecium DO] AFK58238 [Enterococcus faecium DO]  ali follow..  7  5VKKLIASILFVFPLLMVTSVTNESTQSENQSFDKTTFSEESITSETTESQSEASTNKRQEENKTSETSEVAEQTSDSSEAALARAVS-ADGYSEAATTEELAQ............... 112
9 -9.680IDP06042 hypothetical protein jhp0369 [Helicobacter pylori J99] NP_223088 [Helicobacter pylori J99]  ali follow..  6  7SKKIRNLILCFGFILSLCAEENITKENMTETNTTEENTPKDAPILLEEKRAQTLELKEENEVAKKIDEKSLLEEIHKKKRQLYMLKGELHEKNESILFQQMAKNKS............ 112
10 -9.410IDP05034 conserved hypothetical protein [Bacillus anthracis str. Ames] BA_1274 [Bacillus anthracis str. Ames]  ali follow..  9  1MNKKTIFFLLTCLLLVASTTYIICNKREQVPEGQEYYVTNEPAKAEEVG-QRLGEVTKKIETSEKPIKNSESNIVQEKTEVFTMIEEEKGPHSPLIIKEPDGEEYRIVRAMLK..... 117
11 -9.370IDP05010 putative lipoprotein [Bacillus anthracis str. Ames] BA_4934 [Bacillus anthracis str. Ames]  ali follow..  7  1MKKVLMLFVLLLTASILLIGCSTKKEKAGMNLEKAQ--------KVEIESLTDSSEKKVITD-KKEIEKLFEVMKMDKWEMQSAPLDTPQGKTFKMYQEDTTKLSESSKDKKE..... 104
12 -9.350IDP01854 gene: pagC; virulence membrane protein PAGC precursor [Salmonella typhimurium LT2] STM1246 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  8  1MKNIILSTLVITTSVLVVNVAQADT............................................................................................. 25
13 -9.250IDP05483 putative lipoprotein [Bacillus anthracis str. Ames] BA_3005 [Bacillus anthracis str. Ames]  ali follow..  14  1MRRMLLIIISAIAAFALAACTGNKVDE--STSKNFISKAEEIVSLLN------------------------------EAKYKEVHEKFDSKMTAALSEEKMKDLTPIIEK........ 78
14 -9.190IDP05580 putative lipoprotein [Bacillus anthracis str. Ames] BA_0936 [Bacillus anthracis str. Ames]  ali follow..  22  2LKKLGLVLGSAVALSLVACGDSTKEASNEKKEEPKQEAKKENKEN......................................................................... 47
15 -9.080IDP04197 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_2510 [Clostridium perfringens ATCC 13124]  ali follow..  15  1MKKVPVLVIIIFALLFVGCTNSSNSSSDSSVEIINSNQQNSNSNNNNSSNNDTKKSDSNNASHKDNKDNNVSNNKNTNKKLDNKAEKLLKDIKEKAVKGE.................. 102
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.