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Query: HGC00044 gi|162658718|dbj|BAAX01000887.1|1.0 TMP00920;, from HGM_OVER

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst YRYYETRYADCVNGVGNAASPVGAYASSTEWNYDNEVAYGFGYGLSYTTFTQEIQGQPEISVNIDSETGAPQAYATFNVKVTNTGKVPGKTSVQIYGQAPYTEGGLEKVAIQLLNFEKSSELAPGASEIVSVKVDLQYIASYDMEHDNGDGTTGTYVLDPGTYYFAAGNGAHDALNNILVLQGADESKMVGTGSAAAAVAQEITEDLISRTAFSVSKTGEKISNQIPYADWNYYQPGEVTYLTRADWAGTFPKTYDQMTLTSEKLISDLNGNYYTIATDDDTSDIKWGENSNLMFYQMFGLDFDDPKWDELLDKMTLEEAQYLATYGGPSIPGVESIGTVETYMTENAGNGVAVNLNASKLast
1 -9.360sp|P43308|SSRB_HUMAN(removed signalp:1-17) Translocon-associated protein subunit beta OS=Homo sapiens GN=SSR2 PE=1 SV=1  ali follow..  11  11..............................................................SLLNRYAVEGRDLTLQYNIYNVGSSAALDVE------------LSDDSFPPEDFGKWDRIAPASNVSHTVVLRPLKAGYFN......................................................................................................................................................................................................................... 87
2 -8.140sp|Q6Q759|SPG17_HUMAN Sperm-associated antigen 17 OS=Homo sapiens GN=SPAG17 PE=1 SV=1  ali   133............................................VKFGVLKE-------------------GHTYATVVKLKNVGVDF----CRFKVKQP-------PPSTGLKVTYKPGPVAAGMQTELNIELFATAVGEDGAKGSAHISHNIEIMTEHEVLFLPVEATV............................................................................................................................................................................................. 229
3 -7.380sp|Q8TEP8|CE192_HUMAN Centrosomal protein of 192 kDa OS=Homo sapiens GN=CEP192 PE=1 SV=2  ali   14  81.........................................GYG-GTSNLILEGVKKLSDSYMVTVNGLVPGKESKIVFSVRNTGSRA--FVKAVGFKDSQKKVLLDPKVLRIF--PDKFVLKERTQENVTLIYNPSDRGINNKT-----------ATELSTVYLFGGDEISRQQYRRALL................................................................................................................................................................................... 205
4 -7.300sp|Q14596|NBR1_HUMAN Next to BRCA1 gene 1 protein OS=Homo sapiens GN=NBR1 PE=1 SV=3  ali   20  232................................................................DGTHLQPGTKFIKHWRMKNTGNVKWSADTKLFMWGNLTLASTEKKDVL------VPCLKAGHVGVVSVEFIAPA.............................................................................................................................................................................................................................. 300
5 -7.210sp|Q92545|TM131_HUMAN Transmembrane protein 131 OS=Homo sapiens GN=TMEM131 PE=1 SV=2  ali   18  21.........................................GQG-PGSSLRFKITEALLKDCTDSLKLREPNFTLKRTFKVENTGQLQ--HIETIEISGYSCEG----------GFKQEFTLSANASRDIIILFTPDFTAS........................................................................................................................................................................................................................... 126
6 -7.120sp|Q4G0P3|HYDIN_HUMAN Hydrocephalus-inducing protein homolog OS=Homo sapiens GN=HYDIN PE=1 SV=2  ali   2..........................GHANIIAQAKALCEVEEGPTYE--EASLVNYSFDTKDIHYGLQLFDHVTEREITLTNMGKVG----FEFKVLTDHQSSPDNLLPGVPLILPVSGFISSHQEQVLKVYYLPGVPEVFKRS....................................................................................................................................................................................................................... 119
7 -7.070sp|Q8TBZ2|MYBPP_HUMAN MYCBP-associated protein OS=Homo sapiens GN=MYCBPAP PE=1 SV=2  ali   114............................................ACWIRGSNPQDKRQVGIAAHLTFETLEGEKTSSELTVVNNGTVA---IWYDWRRQHQPDTFQDLKKNRMQRFNREGVILPGEIKTFTFFFKSLTAGVFREF----------WEFR......................................................................................................................................................................................................... 218
8 -7.060sp|Q7Z2K6|ERMP1_HUMAN Endoplasmic reticulum metallopeptidase 1 OS=Homo sapiens GN=ERMP1 PE=1 SV=2  ali   15  1...............................AYVSAAKHPFASVVAQEVFQSGIIP--------------SDTDFRI---YRDFGNIPGIDLAYIYHTKYDTADRILTDSIQRAGLAVLKHLATSDMLAAASKYRHGNMVFFDV----------------GLFVIAYPSRIGSIINYMVVMG.................................................................................................................................................................................. 127
9 -6.880sp|Q9Y2L5|TPPC8_HUMAN Trafficking protein particle complex subunit 8 OS=Homo sapiens GN=TRAPPC8 PE=1 SV=2  ali   13  109.......................................LIKTSLHYPPFHQKSL------------------LVPVTLLLSNCSKADVDVIVDLRHKTTSPEALEIHGSFTWLGQTQYKQLKSQEIHSLQLKA----------------------FVHTGVYNL................................................................................................................................................................................................... 202
10 -6.810sp|Q9Y238|DLEC1_HUMAN Deleted in lung and esophageal cancer protein 1 OS=Homo sapiens GN=DLEC1 PE=2 SV=2  ali   13  229............................................GFFTDYE-------------------IGPVYEMVIALQNTTTTS-----YLRVLPPSTP-----ALGLGMFPGKGGMVAPGMTCQYIVQFFPDCLGDF.......................................................................................................................................................................................................................... 300

FFAS is supported by the NIH grant R01-GM087218-01
1 4 5 8 9 3   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Slabinski L, Jaroszewski L, Rychlewski L, Wilson IA, Lesley SA, Godzik A. XtalPred: a web server for prediction of protein crystallizability. Bioinformatics. 2007 Dec 15;23(24):3403-5. Epub 2007 Oct 5.