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Query: HGC00164 gi|163636082|dbj|BABG01000191.1|4.0 TMP00833;, from HGM_OVER

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MNDLIVDVKLWGESVGSLYWEKESNAALFDYERKFIRSGLDISPIIMPISQYRNTPYRFLENRTDCFKGLPGLFADSLPDTFGNQIINEWFASKGLSGEEITPLDRLCYVGKRGMGALEFEPSSPINGMNESSVLHIEELTELAKSVFTDRMAFQVQLRQEGRNILDILKVGTLast
1 -6.650sp|Q502W6|VWA3B_HUMAN von Willebrand factor A domain-containing protein 3B OS=Homo sapiens GN=VWA3B PE=2 SV=3  ali   18  4........................................................................LLTDGRPDQPPETVIDQVKRFQEIPIYTIIANRFLKEVAALTGGEFHF--NFGCKDPTPPEAVQNEDLTLLVKEMEQGHS..................... 89
2 -6.150sp|Q9P144|CY014_HUMAN Putative uncharacterized protein NCRNA00185 OS=Homo sapiens GN=NCRNA00185 PE=5 SV=1  ali follow..  18  5........................................................................MLVYSLPDVYMKRLSANIFHHSACNYEKFSSKK-LAKLSTNRIGSIMF..................................................... 53
3 -6.120sp|Q7Z4H3|HDDC2_HUMAN HD domain-containing protein 2 OS=Homo sapiens GN=HDDC2 PE=1 SV=1  ali follow..  44..........................................................................ESVSDHMYRMAVMAMVIKDDRLNKDRCVRLALVHDMAECIVGDIAPADNIPKEEKHRREEEAMKQITQLLPE-YETQSSAEAKFVKQLDQCEMILQA.. 151
4 -6.080sp|P48382|RFX5_HUMAN DNA-binding protein RFX5 OS=Homo sapiens GN=RFX5 PE=1 SV=1  ali   12  1..............LGG------RGQSKYCYS---IRRKTLVSMPPLP-LKGSESPEMGPEVTPAPRDELVEAACALTCD-WAERILKRSF-------SSIVEVAFLLLISARSAHAHVLKAMGLAEEDEHAPRERSSKPKNGLENPEGGAHKKPERLAQPPKDLE....... 142
5 -6.040sp|P12882|MYH1_HUMAN Myosin-1 OS=Homo sapiens GN=MYH1 PE=1 SV=3  ali   16  88IEDMAMMTHLHEPAVLYNLKERYAAWMIYTYSGLFC---VTVNPYKLPVYNTAYRGKKRQEAPPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTKRVIQYFATIAVTGEKKKEEVTSGKMQGTLEDQIISANPLLEAAKTVRNDNSS.................... 245
6 -5.980sp|Q9BY66|KDM5D_HUMAN Lysine-specific demethylase 5D OS=Homo sapiens GN=KDM5D PE=1 SV=2  ali   133.SRQYLRYRYTLDELPTMLHKLKIRAESFD--RVALEVEDGRKRSFEELRALESEARERRFPNSELLQRLKNCLSEV--EACVLGLVSGQVARMDTPQLTLTELRVLL----EQMGSLPC---------AMHQIGDVKDVLEQVEAYQAEAREALATLPSSPGLLRSLLERGQ 296
7 -5.950sp|Q9UKX2|MYH2_HUMAN Myosin-2 OS=Homo sapiens GN=MYH2 PE=1 SV=1  ali   16  88IEDMAMMTHLHEPAVLYNLKERYAAWMIYTYSGLFC---VTVNPYKLPVYKTAYRGKKRQEAPPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTKRVIQYFATIAVTGEKKKEEITSGKIQGTLEDQIISANPLLEAAKTVRNDNSS.................... 245
8 -5.880sp|Q9Y623|MYH4_HUMAN Myosin-4 OS=Homo sapiens GN=MYH4 PE=1 SV=2  ali   16  88IEDMAMMTHLHEPAVLYNLKERYAAWMIYTYSGLFC---VTVNPYKLPVYNTAYRGKKRQEAPPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTKRVIQYFATIAVTGEKKKEEPASGKMQGTLEDQIISANPLLEAAKTVRNDNSS.................... 245
9 -5.880sp|O43451|MGA_HUMAN(removed signalp:1-35) Maltase-glucoamylase, intestinal OS=Homo sapiens GN=MGAM PE=1 SV=5  ali   1..............................YTGVDINARGEWKTLPAPL--------------------------DHIN---GGYILPWQEPALNTHLSRQKFMGFKIALDDEAGGWL-FWDDGQSIDTYGKGLYYLASFSASQNTMQSHIIFNNYITGTNPLKLGYIEIWG. 118
10 -5.640sp|P55196|AFAD_HUMAN Afadin OS=Homo sapiens GN=MLLT4 PE=1 SV=3  ali   163..............................................................................PDPWKRDAKEKLEKQQQMHIVDML---------SKEIQELQSKPDRSAEESDRLRKLMLEQFQKRLQESKQKDEDDEEEEDDDVDTMLIMQR... 246

FFAS is supported by the NIH grant R01-GM087218-01
1 4 5 8 9 3   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Slabinski L, Jaroszewski L, Rychlewski L, Wilson IA, Lesley SA, Godzik A. XtalPred: a web server for prediction of protein crystallizability. Bioinformatics. 2007 Dec 15;23(24):3403-5. Epub 2007 Oct 5.