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current user: public |
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Query: HGC00267 gi|163310129|dbj|BABD01000566.1|6.0 TMP00066;, from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 | |||||||
# | Score | Template | Links and tools | %id | First | MDEKEVSEMQEEMMTVLVVEPMKAPYVKHIPNELEDLQQAVGGDIEMTYPFDDEVGILLNGNGKFEGLPLNRALYDDHGQVYDAIAGTFLVVGLTEDDFTSLTPEQIEKFKEKYQSPEIFTLFNGELHVMKMPPEEEKEQKESRKNDAKQKNPAKKKNRSGDAR | Last |
1 | -6.170 | sp|P49915|GUAA_HUMAN GMP synthase [glutamine-hydrolyzing] OS=Homo sapiens GN=GMPS PE=1 SV=1 | ali | 16 | 57 | .LETPAFAIKEQGFRAIIISGGIGKPVLGICYGMQMMNKVFGGTVHKKSVREDGVFSVDNTCSLFRGLQKEEVVLLTHGDSVDKVADGFKVVARSGNIVAGIANESKKLYGAQF-HPEVGLTENGKVILKNFLYDIAGCSGTFTVQNRELECIREIKERVGTSK | 238 |
2 | -6.040 | sp|Q92750|TAF4B_HUMAN Transcription initiation factor TFIID subunit 4B OS=Homo sapiens GN=TAF4B PE=1 SV=2 | ali | 13 | 254 | .TMLENVKKCKNFLAMLIKLACSGSQSPEMGQNVKKLEQLLDAKIEA..................................................................................................................... | 300 |
3 | -5.940 | sp|P00387|NB5R3_HUMAN(removed signalp:1-33) NADH-cytochrome b5 reductase 3 OS=Homo sapiens GN=CYB5R3 PE=1 SV=3 | ali follow.. | 12 | 163 | .......KDPDDHTVCHLLFANQTEKDILLRPELEELRNKHSARFKLWYTLDRAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYA--DHVGHPTERCFVF...................................................... | 268 |
4 | -5.890 | sp|Q9Y3I1|FBX7_HUMAN F-box only protein 7 OS=Homo sapiens GN=FBXO7 PE=1 SV=1 | ali follow.. | 14 | 1 | .............MR-LRVRLLKRTWPLEVPETLGHLRSHLRQSLLCTYSSNTRFTITLNYKDPLTG--------EETLASYGIVSGDLICLILQDDIPAPNIPSSTDSEHSSLQNNEQPSLATSSNQTSMQDEQPSDSFQGQAAQSGVWNDDSMLGPSQNFE. | 147 |
5 | -5.760 | sp|Q6BCY4|NB5R2_HUMAN NADH-cytochrome b5 reductase 2 OS=Homo sapiens GN=CYB5R2 PE=1 SV=1 | ali follow.. | 9 | 171 | .......KDPSDRTRMSLIFANQTEEDILVRKELEEIARTHPDQFNLWYTLDRPPIGWKYSSGFVTADMIKEHLPPPAKSTLILVCGPPPLIQTAAHPNLGYTQDMIFTY...................................................... | 276 |
6 | -5.720 | sp|Q9UHQ9|NB5R1_HUMAN(removed signalp:1-26) NADH-cytochrome b5 reductase 1 OS=Homo sapiens GN=CYB5R1 PE=1 SV=1 | ali follow.. | 12 | 174 | .......KVPEDPTQCFLLFANQTEKDIILREDLEELQARYPNRFKLWFTLDHPPKDWAYSKGFVTADMIREHLPAPGDDVLVLLCGPPPMVQLA--DKLGYSQKMRFTY...................................................... | 279 |
7 | -5.500 | sp|Q8NHY0|B4GN2_HUMAN Beta-1,4 N-acetylgalactosaminyltransferase 2 OS=Homo sapiens GN=B4GALNT2 PE=2 SV=2 | ali follow.. | 7 | 310 | LYDPGPERKLRNLVTIATKTFLRPHK---LMIMLRSIREYY-----------PDLTVIVADDSEYYTMPFGKGWFAGRNLAISQVTTKYVLW---DDDFLFNEETKIEVLVDVLEKTEL............................................. | 423 |
8 | -5.380 | sp|Q7Z3T8|ZFY16_HUMAN Zinc finger FYVE domain-containing protein 16 OS=Homo sapiens GN=ZFYVE16 PE=1 SV=3 | ali | 11 | 29 | LVDLRNYQYTLHNIDQLLIHMEMGKSCIKIPKKYSDVMKVLNSSNEHVISIADSHLVCIQNDGIY-----ETQANSATGHPRKVTGASFVVFNVEDGLMVQITPETMNGLRLALREQKDFK........................................... | 167 |
9 | -5.190 | sp|O75594|PGRP1_HUMAN(removed signalp:1-21) Peptidoglycan recognition protein 1 OS=Homo sapiens GN=PGLYRP1 PE=1 SV=1 | ali follow.. | 11 | 21 | .LASECAQHLSLPLRYVVVSHTAGSSCNTPASCQQQARNVQHYHMKTLGWCDVGYNFLIGEDGLVEGRGWNFTGAHSGHLWNPMSIGISFM---GNYMDRVPTPQAIRAAQGLLA................................................. | 132 |
10 | -5.180 | sp|Q92620|PRP16_HUMAN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo sapiens GN=DHX38 PE=1 SV=2 | ali | 5 | 1 | ..................IMVQQRMSLASCGTDWDIVRKCIAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKE-QCVTAVDGEWLAELGPMF-----YSVKQAGKSRQENRRRAKEEASAMEEEMALAEEQLRARRQEQEKR | 143 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Friedberg I, Nika K, Tautz L, Saito K, Cerignoli F, Friedberg I, Godzik A, Mustelin T. Identification and characterization of DUSP27, a novel dual-specific protein phosphatase. FEBS Lett. 2007 May 29;581(13):2527-33. Epub 2007 Apr 30. |