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Query: HGC00429 gi|162734516|dbj|BAAZ01029480.1|1.0 TMP00411;, from HGM_OVER

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MLKENQGYVIRRTILFDNQCGFALGENSRAPNPFVTWQFNGQDGHRDYFWGHYMNEPDMAERDLLNRARDYQRRYHVEEVEQAPDKETYLYYSTQRPIDIGTYPNSYFNRPVHMDLYFTRQQVTGEIFQAWGAITYAHPLTEREMQDYELRPSRNNLDIRRQMDAQAQVVGKWEDAHHVPDQKRLTWFYPDFGSYVVKEYVTPDQLAVRVRSIERQEAARAHKEAKRQPPIAEQLKAAQREAQGHRGPELPKRSPLast
1 -6.830sp|Q6PL24|TMED8_HUMAN Protein TMED8 OS=Homo sapiens GN=TMED8 PE=1 SV=1  ali follow..  11  181...........SRLVVKRGEVVTIRVPTHPEGKRVCWEFATDDYDIGF--GVYFDWTPVTSTDITVQVSDSSDDEDEEEEEEEEIEEPVPAGDVERGSR--SSLRGRYGEVMPVYRRDSHRDVQAGSHDY-GLLKFDNSLRNKTLY-FHI......................................................................................................... 321
2 -6.540sp|Q9H799|CE042_HUMAN Uncharacterized protein C5orf42 OS=Homo sapiens GN=C5orf42 PE=2 SV=3  ali   118...........................................................................................................................................FEQGDAGHLQLLKVKIEPPEVRQGKDSKKRQRRRAEKELQEKRCEKLRRKPN--TFRPENSIINNDDSEIIKKPKEQQEHCGSHPLDDFDVPFEMLQDDNTSAGLHFMASVKKKAI 232
3 -6.350sp|Q8TBB6|S7A14_HUMAN Probable cationic amino acid transporter OS=Homo sapiens GN=SLC7A14 PE=2 SV=3  ali   15  65...................................................................................................................................GLLIY-----------YGIW--NSTLEISAREEALHQSTYQRYDVDDPFSVEEGFSYATEGESQEDWGGPTEDKGFYYQQMSDAKANGRTSSKAKSKSKHKQNSEALIANDELDYSPE...... 171
4 -6.270sp|Q86UU0|BCL9L_HUMAN B-cell CLL/lymphoma 9-like protein OS=Homo sapiens GN=BCL9L PE=1 SV=1  ali   19  240...............................................................................................................................................................................................QRSLVGSEGLSKEQLEHRERSLQTLRDIERLLLRSGETE---PFLKGPPGGAGEGGPPAQAPPP 300
5 -6.230sp|A8MS94|GG2L5_HUMAN Putative golgin subfamily A member 2-like protein 5 OS=Homo sapiens PE=5 SV=2  ali follow..  24  5..........................................................................................................................................................................................................LEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEAHPVALAQKEPEAAAPTP 65
6 -6.230sp|A5D8W1|CG063_HUMAN Uncharacterized protein C7orf63 OS=Homo sapiens GN=C7orf63 PE=2 SV=3  ali   11  5FLEKEGIFLLLDLLALNQ-CNLILGDNPKTAAHVNAWQGKKDQTAASLLIKLWRKEEKETSFQEEQKIIPLPANCPSIAVMDVSENIRAKIYAILGKLDFENLPGEDFVTLCIIHRYLDFKIGE-----IWNEI-------YEEIKLEKLRPVTTDKKALEAITTASENIGK-SLQSDIIESQACQDMQNEQKVYAKQATHKQRELANKSWEDFLARTSNAKTLKKAKSLQEKAIEASRYHKRPQNA........ 272
7 -6.110sp|O00512|BCL9_HUMAN B-cell CLL/lymphoma 9 protein OS=Homo sapiens GN=BCL9 PE=1 SV=4  ali   15  40.............................................................................................................................................................................................EPPTLGENPDGLSQEQLEHRERSLQTLRDIQRMLFPDEKEFTGAQSGGPQQNPGVLDGPQKKPEGP 105
8 -6.070sp|Q9P242|K1486_HUMAN Uncharacterized protein KIAA1486 OS=Homo sapiens GN=KIAA1486 PE=1 SV=3  ali   16  1.............................................................................................................................................................................................................LSTSSETVSSTAASKS-GKTPERTEASAKPRPHSDEYSKKIPPPKPKRNP 49
9 -6.020sp|Q6DKI7|PVRIG_HUMAN Transmembrane protein PVRIG OS=Homo sapiens GN=PVRIG PE=2 SV=1  ali follow..  42...........PEVWVQVRMEATELSSFTIRCGFVSWGGPNGAGGTTLAVLHPERGIRQWAPARQARWETQSSISLILEGSGASSPCANTTFC-----KFASFPEGSWEACGSLAPPTPAPILRADLAGILGVCVYLLHLLRRHKHRPAPRLQPSRTSPQAPRARAWAPSQASQAALHVPYPTHAAHRPQGPAAWASTPIPARGSFVSVENGLYAQAGERPPHTGPGLTLFPDPRGPRAMEGP............ 322
10 -5.930sp|P01031|CO5_HUMAN(removed signalp:1-18) Complement C5 OS=Homo sapiens GN=C5 PE=1 SV=4  ali   30.VETT-AYALLTSLNLKD----------NYVNPVIKWLSEEQR-----YGGGFYSTQDEGLTEYSLLVKQLRLSMDIDVSYKHKGALHNYKMTDKNFL---------------GRPVEVLLNDDLIVSTGFGSTVVHKTSTSEEVCSFYLKIDTQDIEASSSSGSSHAVMDISLPTGISANEEDLKALVEGVDQLFTDYQIKDGHVILQLNSIPSSDFLCVRFRIFELFEV-GFLSPATFTVYEYHRPDKQ.... 286

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 5 8 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Clustering of highly homologous sequences to reduce the size of large protein databases. Bioinformatics. 2001 Mar;17(3):282-3.