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Query: HGC00485 gi|163636056|dbj|BABG01000217.1|3.0 TMP00523;, from HGM_OVER

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MIMNPNILNKNPLMFFDRAVNAQRSQLLTVMADAVSECRTAADQAAELNETGQVGLLRLAEVWSAIRAKEGMGGLILEGTEAKILSDVVAQFYAYLSGCMFNDPVGMAIYAELHYMMSSLMLGEWFELast
1 -8.110sp|Q9HCK8|CHD8_HUMAN Chromodomain-helicase-DNA-binding protein 8 OS=Homo sapiens GN=CHD8 PE=1 SV=5  ali   13  205.......................................................................................................PKDRVLINRIDLVCQAVLSGKW.. 226
2 -8.050sp|Q8TD26|CHD6_HUMAN Chromodomain-helicase-DNA-binding protein 6 OS=Homo sapiens GN=CHD6 PE=1 SV=4  ali   22  142.......................................................................................................PKDRVIINRLDNICHVVLKGKW.. 163
3 -7.970sp|Q3L8U1|CHD9_HUMAN Chromodomain-helicase-DNA-binding protein 9 OS=Homo sapiens GN=CHD9 PE=1 SV=2  ali   18  159.......................................................................................................PKDRVMINRLDSICQTVLKGKW.. 180
4 -7.670sp|Q9P2D1|CHD7_HUMAN Chromodomain-helicase-DNA-binding protein 7 OS=Homo sapiens GN=CHD7 PE=1 SV=3  ali   17  43.....................................................................................DPSVAQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKW.. 82
5 -7.430sp|Q9HCK8|CHD8_HUMAN Chromodomain-helicase-DNA-binding protein 8 OS=Homo sapiens GN=CHD8 PE=1 SV=5  ali   11  1.............................................EKEEKLTDQSRSKLYDEESLLSLTMSQDGFPNEDGEQMTPELLLLQ-----RQRASEWPKDRVLINRIDLVCQAVLSGKW.. 76
6 -6.830sp|Q3L8U1|CHD9_HUMAN Chromodomain-helicase-DNA-binding protein 9 OS=Homo sapiens GN=CHD9 PE=1 SV=2  ali   16  1..............................................................................................YM-LAASYWPKDRVMINRLDSICQTVLKGKW.. 30
7 -6.680sp|P61626|LYSC_HUMAN(removed signalp:1-18) Lysozyme C OS=Homo sapiens GN=LYZ PE=1 SV=1  ali follow..  11  2.VFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAK-RVVRDPQGIRAWVAWRNRCQNRDVRQYVQ 126
8 -6.210sp|Q8WTW3|COG1_HUMAN Conserved oligomeric Golgi complex subunit 1 OS=Homo sapiens GN=COG1 PE=1 SV=1  ali   11  15...........PKVTLQEMLKSCMVQVVAAYEKLSEEKQIKKEGAFPVTQNRALQLLYDLRYLNIVLTAKGDEVKSGRSKPDSRIEKVTDHLEALI------DPFDLDVFLHRLVQRTSVLFG.... 127
9 -6.140sp|Q8N5D0|WDTC1_HUMAN WD and tetratricopeptide repeats protein 1 OS=Homo sapiens GN=WDTC1 PE=1 SV=2  ali   21  240.....QRAPHNAMLYGNRAAAYMKRKWDGDHYDALRDCLKA----ISLNPCHLKAHFRLARCLFEL............................................................. 296
10 -6.110sp|Q96PR1|KCNC2_HUMAN Potassium voltage-gated channel subfamily C member 2 OS=Homo sapiens GN=KCNC2 PE=1 SV=1  ali   12  6..........NKLEFIKNLLNI--IDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILRIFKLTR-------HFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAENIPIGFWW. 130
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li Z, Ye Y, Godzik A. Flexible Structural Neighborhood--a database of protein structural similarities and alignments. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D277-80.