current user: public
If you have questions about the server, please let us know.

Query: HGC00522 gi|163636101|dbj|BABG01000172.1|3.0 TMP00580;, from HGM_OVER

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200
# Score Template Links and tools%idFirst LQTNYKRQRMNIFDIAKQNQEKAWQVIKNTNIIQIWEDAGAKINLVGSLRTGLLMKHRDIDFHIYSSPLNLTDSFQAMARLAENPSIKRIECANLLHTAEACIEWHAWYQNEENELWQMDMIHIREGSRYDGYFEKVAQRISEIMTDEIRETILRLKYETPETEKIIGVEYYQAVIRDGVRDYSGFKEWRKQHPVTGVVEWMPLast
1 -11.200sp|Q9NRJ5|PAPOB_HUMAN Poly(A) polymerase beta OS=Homo sapiens GN=PAPOLB PE=2 SV=1  ali   12  42LIETLRPFGVFEEEEELQRRILVLEKLNNL---SVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRSDFFTSFYAKLKLQEEVKDLRAVEEAFVPVIKLCFD---------EIDILFARLALQTPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLR--------IKLWAKCHNI........ 236
2 -11.200sp|P51003|PAPOA_HUMAN Poly(A) polymerase alpha OS=Homo sapiens GN=PAPOLA PE=1 SV=4  ali   12  42LIETLKPFGVFEEEEELQRRILILGKLNNL--QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFD---------EIDILFARLALQTPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLR--------IKLWAKRHNI........ 236
3 -11.000sp|Q9BWT3|PAPOG_HUMAN Poly(A) polymerase gamma OS=Homo sapiens GN=PAPOLG PE=1 SV=2  ali   11  41LIDAMKPFGVFEDEEELNHRLVVLGKLNNL---SVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFD---------EIDLVFARLAIQTISDNLDLRDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLR--------VKLWAKRRGI........ 235
4 -10.600sp|Q5TAX3|TUT4_HUMAN Terminal uridylyltransferase 4 OS=Homo sapiens GN=ZCCHC11 PE=1 SV=3  ali   10  49.PAHLAALSVAVIELAKEHGITDDDLRVRQEIVEEMSKVECSLRLYGSSLTRFALKSSDVNIDIKFPMNHPDLLIKVLGILKKNVLYVDVESDFHAKVP-------VVVCRDRKSGLLCRVSAGNDMACLTTDLLTALGKIEPVF----IPLVLAFRYCYIDSQTDGGIPSYCFAL........................... 224
5 -9.870sp|Q5TAX3|TUT4_HUMAN Terminal uridylyltransferase 4 OS=Homo sapiens GN=ZCCHC11 PE=1 SV=3  ali   15  199.PAHLAALSVAVIELAKEHGITDDDLRVRQEIVEEMSKVECSLRLYGSSLTRFALKSSDVNIDIKFPP-HPDLLIKVLGILKKNVLYVDVE................................................................................................................ 296
6 -9.790sp|Q5VYS8|TUT7_HUMAN Terminal uridylyltransferase 7 OS=Homo sapiens GN=ZCCHC6 PE=1 SV=1  ali   10  139.PSQINAVGIAIDKVVQEFGLHNENLEQRLEIKRIMENVDCSLRLYGSSCSRLGFKNSDVNIDIQFPA-QPDVLLLVQECLKNSDSFIDVDADFHARVP-------VVCREKQSGL-LCKVSAGNENACLTTKHLTALGKLEPKL----VPLVIAFRY............................................. 292
7 -9.670sp|P29728|OAS2_HUMAN 2`-5`-oligoadenylate synthase 2 OS=Homo sapiens GN=OAS2 PE=1 SV=3  ali   9  12PAQKLGWFIQEYLKPYEECQTLIDEMVNT--ICDVLQEP-QGVAIGGSYGRKTVLRNSDGTLVLFFSDLKRDILDKTGDKLKFCLFTKWLKNNFEIQKSLDGFTIQVFTKNQR----SFEVKTNASPGEFAVCFTELQQKFFDNRPGKLKDLILLIKH............................................. 205
8 -9.550sp|Q5VYS8|TUT7_HUMAN Terminal uridylyltransferase 7 OS=Homo sapiens GN=ZCCHC6 PE=1 SV=1  ali   11  95.PKFLNILDQVCIQCYKDFSPTIIEDQAREHIRQNLESFGTKLSLFGSSKNGFGFKQSDLDVCMTINGLETAEGLDCVRTIEELARVLRKHSGLRNILPITTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRV----KYLCYTMKV---GDASRGSLSSYAYTL........................... 275
9 -9.500sp|Q5VYS8|TUT7_HUMAN Terminal uridylyltransferase 7 OS=Homo sapiens GN=ZCCHC6 PE=1 SV=1  ali   10  1.............KVVQEFGLHNENLEQRLEIKRIMENVDCSLRLYGSSCSRLGFKNSDVNIDIQFPMSQPDVLLLVQECLKNSDSFIDVDADFHARVP-------VVVCREKQSGLLCKVSAGNENACLTTKHLTALGKLEPKL----VPLVIAFRY---DRPEEGGLPPYVFAL........................... 164
10 -9.350sp|Q9Y6K5|OAS3_HUMAN 2`-5`-oligoadenylate synthase 3 OS=Homo sapiens GN=OAS3 PE=1 SV=3  ali   9  3..GDLDKFISEFLQPNRQFLAQVNKAVDT--ICSFLKEN-IKVVKGGSSAKGTALR-SDADLVVFLSCFSISEIRAQLEACQQERQF-EVKFEVSKWENPRVLSFSLTSQTMLDQSVDFDV---SNAGEYSTCFTELQRDFIISRPTKLKSLIRLVKH............................................. 201
11 -9.350sp|Q5TAX3|TUT4_HUMAN Terminal uridylyltransferase 4 OS=Homo sapiens GN=ZCCHC11 PE=1 SV=3  ali   13  195.NRFREILDLVCKRCFDELSPPCSEQHNREQILIGLEKFKARLCLFGSSKNGFGFRDSDLDICMTLEGHENAEIENLAKILKRHPGLRNIL................................................................................................................ 298
12 -9.260sp|Q9Y6K5|OAS3_HUMAN 2`-5`-oligoadenylate synthase 3 OS=Homo sapiens GN=OAS3 PE=1 SV=3  ali   13  7PAAALDRFVARRLQPRKEFVEKARRALGA--LAAALRER-LKTVKGGSSGRGTALK-CDSELVIFLDCFKAEILSEMRASLESWWQNPVPGLRLTFPEQSVPGALQFRLTSVDLED-DVSL---CQGGEHAACFTELRRNFVNIRPAKLKNLILLVKH............................................. 208
13 -9.150sp|Q5TAX3|TUT4_HUMAN Terminal uridylyltransferase 4 OS=Homo sapiens GN=ZCCHC11 PE=1 SV=3  ali   8  45.NRFREILDLVCKRCFDELSPPCSEQHNREQILIGLEKFKARLCLFGSSKNGFGFRDSDLDICMTLEGHENAEKLNCKEIIENLAKILKRHPGLRNILPITTAKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSLSSYAYIL........................... 226
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 9 1 2   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ginalski K, Grishin NV, Godzik A., Rychlewski L. Practical lessons from protein structure prediction. Nucleic Acids Res. 2005 Apr 1;33(6):1874-91.