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Query: HGC00552 gi|162599220|dbj|BAAV01006262.1|2.0 TMP00636;, from HGM_OVER

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .
# Score Template Links and tools%idFirst MRKFNYKRLIVMLVVVLAITCLMATTAFAAGTGDVAGAVESTWSTASTQIKSVVDNVVFPAIDLILAVFFFAKLGTAYFEYRKSGQFEWAAPAILFACLVFTLTAPMYLWSIIGILast
1 -9.140sp|Q9BSN7|TM204_HUMAN(removed signalp:1-25) Transmembrane protein 204 OS=Homo sapiens GN=TMEM204 PE=2 SV=1  ali follow..  21  73...............MMRACNLVATAALTAGQ--LLGLVGLPLLSPDAPCWEEAMAAAFQLASFVLVIGL-----VTFYRIGPYTNLSWSCYLNIGACLLATLAAAMLIWNIL.. 166
2 -8.380sp|Q9P2D7|DYH1_HUMAN Dynein heavy chain 1, axonemal OS=Homo sapiens GN=DNAH1 PE=1 SV=3  ali   24  192....................................SDEKVRWQETVENLQYMLNNIS----DVLVAAGFVAYLGPFTGQYRTVLYDSWVKPHTSEPTLIGTLGNPVKIWQIAGL 276
3 -8.360sp|A6NN79|PERPL_HUMAN(removed signalp:1-24) Putative PERP-like protein OS=Homo sapiens PE=2 SV=3  ali follow..  16  64........VSILVICFILSFFVLCVPQILVFLRVIGGLL------ALAAVFQIISLVIYPV---YTQPSTFMPSPAVTSIYNWACGFGWAAMIILIGCAFFCCCLPSCEDDLLG. 161
4 -8.310sp|Q9H2Y9|SO5A1_HUMAN Solute carrier organic anion transporter family member 5A1 OS=Homo sapiens GN=SLCO5A1 PE=2 SV=2  ali   15  121YVVLTDSRCFLVCMCFLTFIQALMVSGYLSS---VITTIERRYSLKSSESGLLVSCFDIGNLVVVVFV--------SYFGGRGRRPLWLAVGGLLIAFGAALFALPHFI...... 218
5 -8.010sp|Q8TDX9|PK1L1_HUMAN Polycystic kidney disease protein 1-like 1 OS=Homo sapiens GN=PKD1L1 PE=2 SV=1  ali   13  1...YLHTPRLTVSFSLLCVYACLTALVAAGGQEQPHLDVSPTLGSFRVGLLCTL--LASPGAQLLSLLFRLSK.......................................... 68
6 -7.710sp|Q9Y5Y9|SCNAA_HUMAN Sodium channel protein type 10 subunit alpha OS=Homo sapiens GN=SCN10A PE=1 SV=2  ali   229.................................DTTKSPWDVGWQVRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKALLEYTVFTFI-FVF............ 299
7 -7.610sp|Q9NUN5|LMBD1_HUMAN(removed signalp:1-29) Probable lysosomal cobalamin transporter OS=Homo sapiens GN=LMBRD1 PE=1 SV=1  ali follow..  14  22.........IFSLAIALITSALLPVDIFLVSYMKNQNGTFKDWAN-ANVSRQIEDTVGYYTLYSVILFCVFFWIPFVYFYYEEKDDDDTSKCTQIKTALKYTLGFVVICALLL.. 126
8 -7.610sp|Q7Z443|PK1L3_HUMAN Polycystic kidney disease protein 1-like 3 OS=Homo sapiens GN=PKD1L3 PE=1 SV=1  ali   18  2....RVQRLSC--CMTLLLCNMVINVMFWKINSTTARPFAVAWSELLVSIHTAV--ILFPINLVIGRLFPLIE.......................................... 72
9 -7.490sp|A0PG75|PLS5_HUMAN Phospholipid scramblase family member 5 OS=Homo sapiens GN=PLSCR5 PE=2 SV=2  ali follow..  18  206..........................VKTINEKLTIGKISKYWSGFVNDVFTNADNIHVPA--AMIGACFL--FDFMFFEHSLAG.............................. 270
10 -7.490sp|Q9BQF6|SENP7_HUMAN Sentrin-specific protease 7 OS=Homo sapiens GN=SENP7 PE=1 SV=4  ali   13  219.................QLDFIFTSVYIGKIKGASKGCVTITKKYIKIPFQVSLNEI---------------SLLVDTTHLKRFGLWK-RSHAILFFWV................ 292

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 2 1 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Jaroszewski L, Rychlewski L, Godzik A. Sensitive sequence comparison as protein function predictor. Pac Symp Biocomput. 2000;:42-53.