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Query: HGC00915 gi|162810474|dbj|BABA01034235.1|2.0 TMP01234;, from HGM_OVER

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSKKKRGEERMKEEDNILKKVGKKNSFKVPEGYFENLTSEVMGKLPEKEGPAFEEVKQPMMWIRMKPLLYMAAMFIGAALIIRVASSNHQPTTAGDHLTANEAATEVVSDEYIDVALDRSMLDDYSLSVYLSDATAELast
1 -7.950sp|Q9NQR9|G6PC2_HUMAN Glucose-6-phosphatase 2 OS=Homo sapiens GN=G6PC2 PE=1 SV=1  ali follow..  6  83WVQETQIYPNHSSPCLEQFPTTCETGPGSPSGHAMGASC-MVTAALSHTVCGMDKFSITLHRLTWSFLWSVFWLIQISVCISRVFI................................................... 171
2 -7.580sp|Q86YC2|PALB2_HUMAN Partner and localizer of BRCA2 OS=Homo sapiens GN=PALB2 PE=1 SV=1  ali   25  10........................TDFQLPDEDFGPLKLEKVKSCSEKPVEP..................................................................................... 37
3 -7.580sp|Q3B820|F161A_HUMAN Protein FAM161A OS=Homo sapiens GN=FAM161A PE=2 SV=2  ali   26  251RSACGCRNPRCPEQAVKLKCKHKVRC-PTPD--FEDLPERYQKHLSEHKSPK..................................................................................... 299
4 -7.560sp|Q8NFP9|NBEA_HUMAN Neurobeachin OS=Homo sapiens GN=NBEA PE=1 SV=3  ali   15  254.DLGFRGMPMTEEQRRQFSPGPRTTMFRIPEFKWSPMHQRLLTDL............................................................................................ 297
5 -7.080sp|Q86YC2|PALB2_HUMAN Partner and localizer of BRCA2 OS=Homo sapiens GN=PALB2 PE=1 SV=1  ali   19  145........DGMLSLKQLLSFLSITD-FQLPDEDFGPLK---LEKVKSCSEKPVE................................................................................... 186
6 -6.870sp|Q5T9Z0|TEDM1_HUMAN Transmembrane epididymal protein 1 OS=Homo sapiens GN=TEDDM1 PE=2 SV=1  ali follow..  2  147.........ELWAPNMCHLQLMETFLILMMGSWLMQAGFILYRPVSGYPWQDDDISDIMFVTTFFCWHVMINASFLLGIYGFSSFWYHCFRPSLKLTGPKEAPYYASTPGPLYKLLQEVEQSEKEDQALLLPKSS.. 272
7 -6.860sp|Q9NSI2|CU070_HUMAN Uncharacterized protein C21orf70 OS=Homo sapiens GN=C21orf70 PE=1 SV=2  ali follow..  8  182..SAAQRQQLLEEERTRFQELLASPAYRAP---LVAIGQTLARQMQLEDGGQ..................................................................................... 229
8 -6.810sp|Q13635|PTC1_HUMAN Protein patched homolog 1 OS=Homo sapiens GN=PTCH1 PE=1 SV=2  ali   12  231LRDTSDFVEAIEKVRTICSNYTSLGPNGYPFLFWEQLRHWLLLFIS----------------------VVLACTFLVCAVF........................................................ 296
9 -6.680sp|A8MTA8|F166B_HUMAN Protein FAM166B OS=Homo sapiens GN=FAM166B PE=2 SV=1  ali follow..  17  1..........MAVASTFIPGLNPQNPHYIP-GYYGQVTGQLLRGPPGLAWPPVHRT................................................................................. 59
10 -6.620sp|Q7Z3U7|MON2_HUMAN Protein MON2 homolog OS=Homo sapiens GN=MON2 PE=1 SV=2  ali   17  8.......TVQGSAKATYLEMLDKVEPPTIPEGYAMSVAFHCLLDLVR.......................................................................................... 47
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 9 4 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Tolerating some redundancy significantly speeds up clustering of large protein databases. Bioinformatics. 2002 Jan;18(1):77-82.