FFAS03 results for HGC00947

Query: HGC00947 gi|162844524|dbj|BABA01000185.1|4.0 TMP01280;, from HGM_OVER

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 .`
#	Score	Template	Links and tools	%id	First	`MRKLVKLILLCLIAYPIISIVSSCSEEEDCSMNARPMMQCYLYKIDGETERVVNDTLDSLTITAFGTDSIILNNQKRVHGLSLPLRYTADSTVLVFHYSKDVKIKKDTIVIRQKNTPYFLSMDCGYQMKQSITGRSYSRHLLDSIYIQTAEVSIYGTENLKLFYRN`	Last
1	-8.300	`sp\|P23229\|ITA6_HUMAN(removed signalp:1-23) Integrin alpha-6 OS=Homo sapiens GN=ITGA6 PE=1 SV=4`	`ali`	9	35	`................VHFLKEGCGDDNVCNSN----LKLEYKFCTREGNQDKFSYLPI-------QKGVPELVLKDQKDIALEITVTNSPSNPRNPTKDGDDAHEAKLIATFPDTLTYSAYRCEFYLVLSTTEVTFDTPDLDINLKLETTSNQDNLAPITA....`	203
2	-8.100	`sp\|Q13683\|ITA7_HUMAN(removed signalp:1-33) Integrin alpha-7 OS=Homo sapiens GN=ITGA7 PE=1 SV=3`	`ali`	13	41	`................IHFLKQGCGEDKICQSN------LQLVRARFCTRVSDTEFQPLPMDVDGTTALFALSGQ---PVIGLELMVTNLPSDPAQPQADGDDAHEAQLLVMLPDSLHYSGVRC-FYLILSTSGISIETTELEELLLATISEQELHPVSARA....`	210
3	-8.050	`sp\|Q9UKX5\|ITA11_HUMAN(removed signalp:1-22) Integrin alpha-11 OS=Homo sapiens GN=ITGA11 PE=1 SV=2`	`ali`	13	5	`...................FWNGCNEDEHCVPDLVLDARSDLPTAMEYCQRVLRKPAQDCSAYTLSFDTTVFIIESTRQRVAVEATLE----------NRGENAYSTVLNISQSANLQFAS.............................................`	96
4	-7.900	`sp\|Q7Z4F1\|LRP10_HUMAN(removed signalp:1-16) Low-density lipoprotein receptor-related protein 10 OS=Homo sapiens GN=LRP10 PE=1 SV=2`	`ali`	13	202	`.....................QSCHWLLDPHDGRRLAVRFTALDLGFG------DAVHVYDGPGPPESSRLLRSLTHFSN-GKAVTVETLSGQAVVSYHTVAWSNGRGFNATYHVRGY--DRPCG.........................................`	300
5	-7.840	`sp\|Q9H0V9\|LMA2L_HUMAN VIP36-like protein OS=Homo sapiens GN=LMAN2L PE=1 SV=1`	`ali follow..`	10	16	`RCLSARDGSRMLLLLLLLGSGQGPQQVGAGQTFEYLKREHSLSKPYQGVGTGSSSLWNLMGNAMVMTQYIRLTPDMQSKQGALPCFLRDWELQVHFKIHGQGKKNLDGLAIWYTKDRMQPGPVFGNMDKFVGLGVFVDT...........................`	160
6	-7.710	`sp\|P23229\|ITA6_HUMAN(removed signalp:1-23) Integrin alpha-6 OS=Homo sapiens GN=ITGA6 PE=1 SV=4`	`ali`	9	188	`...................LKEGCGDDNVCNSNLKLEYKFCTREGNQDKFSYLPIQ--------KGVPELVLKDQ---KDIALEITVTNSPSNPRNPTKDGDDAHEAKLIATFPDTLTYSA-SC..........................................`	292
7	-7.710	`sp\|Q13683\|ITA7_HUMAN(removed signalp:1-33) Integrin alpha-7 OS=Homo sapiens GN=ITGA7 PE=1 SV=3`	`ali`	12	191	`................IHFLKQGCGEDKICQSN------LQLVRARFCTRVSDTEFQPLPMDVDGTTALFALSGQ---PVIGLELMVTNLPSDPAQPQADGDDAHEAQLLVMLPDSLHYSGVRCL.........................................`	299
8	-7.490	`sp\|P08648\|ITA5_HUMAN(removed signalp:1-41) Integrin alpha-5 OS=Homo sapiens GN=ITGA5 PE=1 SV=2`	`ali`	12	1	`....................LLDCGEDNICVPD--------------------------LQLEVFGEQNHVYLGDKNALNLTFHAQNVGEGGAY-----------EAELRVTAPPEAEYSG.............................................`	64
9	-7.100	`sp\|P17301\|ITA2_HUMAN(removed signalp:1-29) Integrin alpha-2 OS=Homo sapiens GN=ITGA2 PE=1 SV=1`	`ali`	7	1	`..............VFSIPFHKDCGEDGLCISDLVLDVRQIPAAQEQPFIVSNQNKRLTFSVTLKNKRESAYNTGIVVDDVGYPALKREQQVTFTINFDFNLQNLQNQASLS-----------------FQALSESQEENKADNLVNLKIPLLYDAEIHLT.....`	162
10	-7.040	`sp\|P13591\|NCAM1_HUMAN(removed signalp:1-19) Neural cell adhesion molecule 1 OS=Homo sapiens GN=NCAM1 PE=1 SV=3`	`ali`	10	10	`.............................CEASGDPIPSITWRTSTRNISSEEKASWTRPEKQETLDGHMVVRSHARVSSLTLKSIQYTDAGEYICTASNTIGQDSQSMYLEVQYAPKLQGPVAVYTWEGNQVNITCEVFAYPSATISGQLLPSSNYSNIKI....`	146

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

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