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Query: HGC00991 gi|163600283|dbj|BABF01000984.1|3.0 TMP01348;, from HGM_OVER

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .
# Score Template Links and tools%idFirst MQVDTKLINLKLWGYITMKKMIAYCGLDCEKCDAYIATINDNQELRKKTAKLWAELNNAPILPEHINCQGCRVDGIKTVFCDNMCGIRQCALEKGVATCGDCLDLERCPTVGEILENNPSALKNLKGLast
1 -10.300sp|P20333|TNR1B_HUMAN(removed signalp:1-22) Tumor necrosis factor receptor superfamily member 1B OS=Homo sapiens GN=TNFRSF1B PE=1 SV=3  ali follow..  13  2........PAQVAFTPYAPEPGSTCQMCCSKCSPGQHAKVFCTKTSDTVCDSCEDSTYTQLWNWVPECLSCGSRCSSDQVETQACT-RICTCRPGWEGCRLCAPLRKCR.................. 122
2 -9.690sp|O60260|PRKN2_HUMAN E3 ubiquitin-protein ligase parkin OS=Homo sapiens GN=PARK2 PE=1 SV=2  ali follow..  20  360........................CGAFCRECKE-TTTQAYRVDERAAEQARWEAASKETIKKTTKPCPRCHVPVEKNGG----CMHMKCPQPQRLEWCWNC......................... 449
3 -9.520sp|Q9UKT4|FBX5_HUMAN F-box only protein 5 OS=Homo sapiens GN=FBXO5 PE=1 SV=1  ali follow..  14  335............................TSLKKDAQTKLSNQGDQKGSTYSRHNEFSEVAKTLKKKACIRCNSPAKYDCYLQRTCKREGC----GFDYCTKCLC-KDCSDGKLLKASTKKSKKNLR. 445
4 -9.370sp|Q86T03|TM55B_HUMAN Transmembrane protein 55B OS=Homo sapiens GN=TMEM55B PE=1 SV=1  ali follow..  15  82..........................ITCRVCQSLINVEGKMHQHV-------------------VKCGVCNEATPKVTSQRIACPRPYCKRIINLGICGHCKN-PHCRKVSSIGRRYPRKR..... 211
5 -9.300sp|O75592|MYCB2_HUMAN Probable E3 ubiquitin-protein ligase MYCBP2 OS=Homo sapiens GN=MYCBP2 PE=1 SV=3  ali   22  190........................CGNLCTDCDRFLHLHRRTKTHQRQVFKEEEEAIKVDLH------EGCEHTGKPTTSSSEAC--RFCGSRSG-SVCSDCQEYAACS.................. 300
6 -9.190sp|P46100|ATRX_HUMAN Transcriptional regulator ATRX OS=Homo sapiens GN=ATRX PE=1 SV=5  ali   13  146...FRSRSKMKTENLKKRGEDGLHGIVSCTACGQQVNHFQKDSIYRHPSL-------------QVLICKNCFKYSRDSDGMDEQCRW--CAEGGNLICCDFCHNCKKC................... 243
7 -9.150sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5 PE=1 SV=1  ali   15  174..KRRRKKKRIDDGDGYETDHQDYCEILCDTCPRAYHLVCLDPELEKAPEGKWS-------------CPHCEGCEEEEDDHMEFCRV--CKDGGELLCCDACPSHLHC................... 292
8 -9.140sp|Q96EP0|RNF31_HUMAN RING finger protein 31 OS=Homo sapiens GN=RNF31 PE=1 SV=1  ali   13  57...........IYEREQLEATCPQCHTFCVRCKRQWEEQHRGRSKRMNDPEYQAQGLAMYLQENGIDCPKCKFSYALARGGCMHFHCTQC----RHQFCSGC......................... 151
9 -9.120sp|A6NFK2|GRCR2_HUMAN Glutaredoxin domain-containing cysteine-rich protein 2 OS=Homo sapiens GN=GRXCR2 PE=3 SV=1  ali follow..  17  197............................CFHCR-----------------------------SGSATCSLCHGSKFSANRFKESYRALRCCNENGLQPCQICNQ....................... 248
10 -9.100sp|Q9C0A1|ZFHX2_HUMAN Zinc finger homeobox protein 2 OS=Homo sapiens GN=ZFHX2 PE=2 SV=3  ali   12  119..........................FRCLVCQAFSTDSLELLLYHCSIGRSLPEAEWKEVAGDTHRCKLCCYGTQLKANFQLHLKTDKHAQKYQLAACNICD---HCLLCAWETPSRLAVLQHLRT 291
11 -9.050sp|O75164|KDM4A_HUMAN Lysine-specific demethylase 4A OS=Homo sapiens GN=KDM4A PE=1 SV=2  ali   191....SQLWQNRPPNFEAEKEFNETMAQHCAVCMIFQTYHQVEFGGFNQNCGNASDLAPQKQRTKPLIPEMCFTSTGCSTDINLSTPYLEEDGTSILVSCKKCS-HASC................... 299
12 -9.040sp|Q6ZMZ0|RN19B_HUMAN E3 ubiquitin-protein ligase RNF19B OS=Homo sapiens GN=RNF19B PE=1 SV=2  ali   21  86......................EFC-YHCKTCDMARQQRAQTLRVRTKHTSGLSYGQESGPADDIKPCPRCSAYIIKMN--DGSCNHMTCAV--GCEFCWLCLSPSGCTFWGK.............. 188
13 -9.040sp|Q9UJW3|DNM3L_HUMAN DNA (cytosine-5)-methyltransferase 3-like OS=Homo sapiens GN=DNMT3L PE=1 SV=2  ali follow..  10  35...RDLIAYEVKANQRNIEDICICCGGICAPCKDKFL----------------DALFLYDDDGYQSYCSICCSGETLLICGNPDCT-FECVHAMSNWVCYLCLPSSRSGLLQRRRKWRSQLKAFYDR 170
14 -9.030sp|Q9C000|NALP1_HUMAN NACHT, LRR and PYD domains-containing protein 1 OS=Homo sapiens GN=NLRP1 PE=1 SV=1  ali   16  1.....................LVSCGLTSDCCQDLASVLSASPSLKELDLQQ----NNLDDVGVRLLCEGLRH---------PACKLIRL----GLDQTTLSDE--MRQELRALEQEKPQLLI.... 83

FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 2 6 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.