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Query: PB003645 Q65HI2_BACLD/1-230 PB003645; Pfam-B_3645;, from HGM_OVER

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MNKRTWIEKLIGHLLPKDEKDGKKLTKYHYFLLLFVLGVSFMLVSQIFSSEPSQEPAADQPAASQKATSESTVQSGEGEKEVFKPASDDKPKESIQDYEQEYENQLKDILETIIGVEDVSIVVNVDATSLKIFEKNRKTQETSTNETDKQGGKRTVSEMSSDEEIVIIKNGDKETPVVVQTKKPDIRGVLVVAQGVDNVQIKKTIIEAVTRVLDVPSHRVAVAPKKMKEDLast
1 -7.560sp|Q9Y5M8|SRPRB_HUMAN Signal recognition particle receptor subunit beta OS=Homo sapiens GN=SRPRB PE=1 SV=3  ali follow..  12  62......................................................................................................SSQRAVLLVGLCDSGKTLLFVRLLTGLYRDTQTSITDSCAVYRVNNNRGNSLTLIDLPGHESL---------RLQFLERFKSSARAIVFVVDSAAFQREVKDVAEFLYQVLMGLKNTPSFLIACNKQD 183
2 -7.390sp|P08F94|PKHD1_HUMAN(removed signalp:1-23) Fibrocystin OS=Homo sapiens GN=PKHD1 PE=1 SV=1  ali   11  150.................................................................................................FMDQTPQVLRFFLLGNKSTSKLLLAVFYHELQSPHVFLGPTLVQSASLLLNESIGANYFNIMDNLLYVVLQGEEPIE------RSGVSIHLALTVMVSVLEKGWEIVILERLTNFLQIGQNQIRFIHEMPGHE 282
3 -7.350sp|Q0P5N6|ARL16_HUMAN ADP-ribosylation factor-like protein 16 OS=Homo sapiens GN=ARL16 PE=2 SV=1  ali follow..  13  21......................................................................................................AKHGMCLLLGATGVGKTLLVKRLQEVSSRDGKGDLGEPPPTRPTVGTN-----LTDIVAQRKITIRELGGCMGPI--SSYYGNCRSLLFVMDASDPTQLSASCVQLLGLLSAEQLAEASVLILFNKID 142
4 -7.090sp|O95071|UBR5_HUMAN E3 ubiquitin-protein ligase UBR5 OS=Homo sapiens GN=UBR5 PE=1 SV=2  ali   11  119.........................................................................SIDTRPFRPASEGNPSDDPEPLPAHRQALGERLYPRVQAMQ-ASKITMLLELSPAQLLLLLASEDSLRARVDEQQENRKRHGSSRSVVDMDLDDTDDGDDNAPLFYQ---PGKRGFYTPRPGKNTEA-RLNCFRNIGRILGLCLLQNELCPI..... 298
5 -6.950sp|Q8N8L6|ARL10_HUMAN(removed signalp:1-21) ADP-ribosylation factor-like protein 10 OS=Homo sapiens GN=ARL10 PE=2 SV=1  ali follow..  10  15............................................................................RERRWDRGEAWWGAEAARLPEWDEWDPEDEEDEEPALEELEQREVVLGLDGAGKSTFLRVLSGKPPLEGHIPTWGFNSVRLPTKDFEVDLLEIGGSQNLRFYWKEFVSEVDVLVFVVDSADRLRLPWARQELHKLLDKDPDLPVVVVANKQD.. 167
6 -6.830sp|Q13795|ARFRP_HUMAN ADP-ribosylation factor-related protein 1 OS=Homo sapiens GN=ARFRP1 PE=1 SV=1  ali follow..  12  15......................................................................................................KDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTT------GLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEALCGVPVLVLANKQD 137
7 -6.750sp|Q8IWF2|FXRD2_HUMAN(removed signalp:1-26) FAD-dependent oxidoreductase domain-containing protein 2 OS=Homo sapiens GN=FOXRED2 PE=1 SV=1  ali   12  96......................................................................................................ARDMVRYLGDFADTLGLRVQYNTTIAHVTLDKDRQAWNGHYFILTDQKGQVHQCS--------VLFVATGLSVPNQ-----VDFPGVLILGRGNSAFETAENILGVTNFIHMLSRSRVRLSWATH... 228
8 -6.450sp|A9YTQ3|AHRR_HUMAN Aryl hydrocarbon receptor repressor OS=Homo sapiens GN=AHRR PE=2 SV=3  ali   9  7.............................................................PPGECTYAGRKRRRPLQKQRPAVGAEKSNPSKRHRDRLNAELDHLASLLSKLDKLSVLRLSVSYLRVKSFFQVVQEQSSRQPAAGAPSPGDSCPLAGSAVLEGRLLLES---------------LNGFALVAEG---------ASATIVDYLGFHQTDVNIYDYIHVDD 167
9 -6.440sp|A6NHG4|DDTL_HUMAN D-dopachrome decarboxylase-like protein OS=Homo sapiens GN=DDTL PE=2 SV=1  ali follow..  17  7.........................................................................................DTNLPANRVPAGLEKRLCAAAASILGKPADRVNVTVRPGLAMAL-------------------------------------SGSTEPCAQ-----SISSIGVVGTAEDNRSHSAHFFEFLTKELALGQDRFPT........ 98
10 -6.350sp|P30046|DOPD_HUMAN D-dopachrome decarboxylase OS=Homo sapiens GN=DDT PE=1 SV=3  ali follow..  17  7.........................................................................................DTNLPANRVPAGLEKRLCAAAASILGKPADRVNVTVRPGLAMAL-------------------------------------SGSTEPCAQ-----SISSIGVVGTAEDNRSHSAHFFEFLTKELALGQDRILI........ 98
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 9 4 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Tolerating some redundancy significantly speeds up clustering of large protein databases. Bioinformatics. 2002 Jan;18(1):77-82.