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current user: public |
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Query: PB004996 Q5NNS6_ZYMMO/1-150 PB004996; Pfam-B_4996;, from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 | |||||||
# | Score | Template | Links and tools | %id | First | MANLDVLFERLSRSSFRRRFRLGVQEQQYLANKGMETILEHGKDFIAQRLAPAEIPNDGKQTPCKGHPVFLAQHATGTCCRGCIEKWHRIEAGKSLSQEEQAYILDVIAHWLDLQKEVPPKKTKAATLNLPKKRKSKAEDVQGSLFPEIE | Last |
1 | -7.270 | sp|P62072|TIM10_HUMAN Mitochondrial import inner membrane translocase subunit Tim10 OS=Homo sapiens GN=TIMM10 PE=1 SV=1 | ali follow.. | 15 | 21 | ......................................................................MYNRMTSACHRKCVPPHY---KEAELSKGESVCLDRCVSKYLDIHERMGKKLTELSMQDEELMKRVQQSSGPA....... | 90 |
2 | -7.210 | sp|Q9Y5J6|TIM9B_HUMAN Mitochondrial import inner membrane translocase subunit Tim9 B OS=Homo sapiens GN=FXC1 PE=1 SV=1 | ali follow.. | 10 | 22 | ........................................................................NRMTELCFQRCVPSL----HHRALDAEEEACLHSCAGKLIHSNHRLMAAYVQLMPALVQRRIADYEAASA........ | 87 |
3 | -7.050 | sp|O60220|TIM8A_HUMAN Mitochondrial import inner membrane translocase subunit Tim8 A OS=Homo sapiens GN=TIMM8A PE=1 SV=1 | ali follow.. | 23 | 35 | ......................................................................LVHQMTELCWEKCMDK-----PGPKLDSRAEACFVNCVERFID..................................... | 72 |
4 | -6.930 | sp|O00562|PITM1_HUMAN Membrane-associated phosphatidylinositol transfer protein 1 OS=Homo sapiens GN=PITPNM1 PE=1 SV=4 | ali | 16 | 10 | .................RLYHSVKTGRGPLSDDWARTAAQTGPLMCAYKLCKVEFRYWGMQAKIEQRRVMLRAHRQAWC----QDEWTE------LSMADIRALEEETARMLAQRMAKCNTGSEGSEAQPPGKPSTEARSAASN...... | 134 |
5 | -6.870 | sp|Q9Y5L4|TIM13_HUMAN Mitochondrial import inner membrane translocase subunit Tim13 OS=Homo sapiens GN=TIMM13 PE=1 SV=1 | ali follow.. | 39 | 38 | ......................................................................LLQRMTDKCFRKCIGK-----PGGSLDNSEQKCIAMCMDRYMD..................................... | 75 |
6 | -6.790 | sp|Q5VUE5|CA053_HUMAN Uncharacterized protein C1orf53 OS=Homo sapiens GN=C1orf53 PE=2 SV=1 | ali follow.. | 15 | 70 | ...................................EELTAAERQIAELHAAACAAGQLNYVDPATGYVVLTQIAQRGECCRHCPYGQVNVKDPSKKKQFNSYFYV............................................. | 145 |
7 | -6.770 | sp|Q9Y5J7|TIM9_HUMAN Mitochondrial import inner membrane translocase subunit Tim9 OS=Homo sapiens GN=TIMM9 PE=1 SV=1 | ali follow.. | 18 | 22 | ........................................................................NKLTETCFLDCVKDF----TTREVKPEETTCSEHCLQKYLK..................................... | 58 |
8 | -6.560 | sp|P49916|DNLI3_HUMAN(removed signalp:1-15) DNA ligase 3 OS=Homo sapiens GN=LIG3 PE=1 SV=2 | ali | 15 | 46 | ..................................GSHLRSRATYLVFLPGLHVGLCSGPCEMAEQRFCVDYAKRGTAGCCKEKIVKWYHLEGWEELEDNEKEQITQHIADLSSKAAGTPKKKAVVQAKLTTTGQVTSPVKGASF...... | 202 |
9 | -6.450 | sp|Q7Z745|HTRB2_HUMAN HEAT repeat-containing protein 7B2 OS=Homo sapiens GN=HEATR7B2 PE=2 SV=3 | ali | 12 | 3 | .............................................IYHHMPVLRQKEESFQFILEAISQIASFHMDTVV-RDTKTLWKALAEKPASSGK----LLQALIDKLETELEDDIARVEAISVACAMYEVISMGTSVTGLYPEL. | 112 |
10 | -6.370 | sp|Q9UPY3|DICER_HUMAN Endoribonuclease Dicer OS=Homo sapiens GN=DICER1 PE=1 SV=3 | ali | 13 | 175 | ........EDYQDAVIIPRYRNFDQPHRFYVAD------------VYTDLTPLSKFPSPEYETFAEY--YKTKY------------------NLDLTNLNQPLLTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILVPEL. | 287 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40. |