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Query: PB005346 A0R807_PELPD/1-258 PB005346; Pfam-B_5346;, from HGM_OVER

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTDSLFWAIDIKNQFHHNWMGMSQINQTTSGNFYSHRNITDQVLENFTDALDCLTAHLMLECSEVLAGVKPANLISIVNRTRPCGRNLYLLWQQHHTDLAQRLNNLNFMVLQSRQQSLLLLCYDHVRLEHHLSHPGIRTLLHKAGYKDDADCEGMLLELRSRIGGNNSFPHEIGLFIGYPAKDVAAFMGLVRLPFTCQRLWKIYGNPARSLALAEQYRCCRNKMGAILARGTSKTLEIDRSDHPFFCQTDENDYQYLPLast
1 -7.810sp|Q9HCG7|GBA2_HUMAN Non-lysosomal glucosylceramidase OS=Homo sapiens GN=GBA2 PE=1 SV=2  ali   10  106LEFSLAWDMPYTRFFGQDGDAAPALSHYALCRYAEWEERISAWQSPVLDD-RSLPAWYKSALFNELYFLADGGTVWLEVLEDSLPEELGRNMCHLRPTLRDYGR-YNTYDVHFYASFALIMLWPK------LELSLQYDMALATLREDLTRRRYLMSGVMAPVKRRNVIPHDIG.................................................................................... 296
2 -7.090sp|Q9NR09|BIRC6_HUMAN Baculoviral IAP repeat-containing protein 6 OS=Homo sapiens GN=BIRC6 PE=1 SV=2  ali   15  4..DTLCWLAGVH-----------------SNGPGSSKEGNENLLSKTRKFLSDIVRVCFFEAGRSIA--KCARFLALCISNGKCDPCQPAFGPVLLKALLDNMSFLPAATTGGSVYWYFVLLNYVKDEDLAGCSTACASLLTAVSRQLQDRLTPMEALLQTRY----------GLY-SSPFDPVL......................................................................... 157
3 -7.070sp|Q6PJT7|ZC3HE_HUMAN Zinc finger CCCH domain-containing protein 14 OS=Homo sapiens GN=ZC3H14 PE=1 SV=1  ali   11  9.............................................................................................................................RKIRSAIKGK-----LQELGAYVDEELPDYIMVMVANKKSQDQMTEDLSLFLG---NNTIRFTV-----------W-LHGVLDKLRSVTTEPSSLKSS................................... 86
4 -7.000sp|Q96LT6|CA074_HUMAN UPF0739 protein C1orf74 OS=Homo sapiens GN=C1orf74 PE=2 SV=1  ali follow..  16  39.........................................................LAGEVLAVARGLKPAVLYDCNCAGASELQSYLEE---------LKGLGFLTFGLHILEIGENSLIVSPEHVCQHLEQVLLGTIASVCSLDQLQDLKALVAEIITHLQGLQRDLSLAGILLGYPV............................................................................. 181
5 -6.990sp|Q6ZVL6|CK041_HUMAN UPF0606 protein C11orf41 OS=Homo sapiens GN=C11orf41 PE=2 SV=2  ali   17  189...........................................................FQLKTVLQFVSQADNIQSCKFAQTMEQRLQKAFQDAERKVLNTKSNLTIQIVSTSNASQAVLVYVVGNQSTFLNGTVASSLLSQLS-------------------------ELVGFYLTYPPLTIAEPLEYPNLD................................................................ 300
6 -6.600sp|Q6ZN30|BNC2_HUMAN Zinc finger protein basonuclin-2 OS=Homo sapiens GN=BNC2 PE=2 SV=1  ali   15  16.................................................................................................NVVFDISSLMLYGTQAVPVRLKILL---DRLFSVLKQEEVLHILHGLGW----TLRDYVR--------------------GYILQDAAGKVLDR---------WAIMSREEETLQQFLRFGETKSIVELMAIQEKEGQAVAVPSSKT.............. 128
7 -6.480sp|Q9BWG4|SSBP4_HUMAN Single-stranded DNA-binding protein 4 OS=Homo sapiens GN=SSBP4 PE=1 SV=1  ali follow..  13  16................................................................................................................QAREKLALYVY---------------EYLLHIGAQ----------------KSAQTFLSEIRWEKNITLGEPPGFLHS---------WWCVFWDLYCAAPDRREACEHSGEAKAFQDYSAA......................... 96
8 -6.320sp|A6NKB5|PCX2_HUMAN(removed signalp:1-15) Pecanex-like protein 2 OS=Homo sapiens GN=PCNXL2 PE=1 SV=3  ali   4ITARDEWVFADMDLLHKVVAPAIRMSLKLHQDQFTCPDEYEDPAVLYEAIQSFEKKVVICHEGDAVLSNKE-ELLTLRHVVDE------------------GADEYKVIMLHRSFLSFKVIKVNKECVRGLWAGQQQELIFLRNRNPERGSIQNNKQVLRNLINSSCDQP------LGYPM--TTSYLGTHRQLKNIWGGPITLDRIRTW--FWTKWVRMRKDCNARQHSGGNIED...................... 220
9 -6.280sp|Q8IZJ4|RGDSR_HUMAN(removed signalp:1-20) Ral-GDS-related protein OS=Homo sapiens GN=RGL4 PE=2 SV=1  ali follow..  11  210MDAELFKKVVLHECLGCIW----------GQGHLKGNEHMAPTVRATIAHFNRLTNCITTSCDHSMRARDRARVVEHWIKVARECLSL-----NNFSSVHVIVSALCSNPIGQLHKTWAGVSSKSMKELKELCKAVKRDLLIKAGSFKVATQERNPQRVQMRLRRQKKVP-----FLGDFLTELQ-RLDSAIPDDLDGN----TNKRSKEVRVLQEMQLLQVAAMNYLRPLEKFVTYFTRMEQLSDKESYKLSCQLEP 450
10 -6.250sp|Q9UL18|AGO1_HUMAN Protein argonaute-1 OS=Homo sapiens GN=EIF2C1 PE=1 SV=3  ali   58.MWKMMLNIDVSAEFMCEVLDIRNIDEQPKPLTDSQRVRFTKEIKGLKVEVTHCGQMKRKYRVCNVTRRPASHQFPLQLESGQTVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYL-IVAGQRCIKKLTDNQTSTMIKATARSAPDRQEEISRLMKNASYNLDPYIQEFGIKVKDDMTEVTGRVRNRAIATPNQGVWDMRGKQFYNGIEIKVW......................................... 299

FFAS is supported by the NIH grant R01-GM087218-01
1 3 9 2 2 3   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Slabinski L, Jaroszewski L, Rodrigues AP, Rychlewski L, Wilson IA, Lesley SA, Godzik A. The challenge of protein structure determination--lessons from structuralgenomics. Protein Sci. 2007 Nov;16(11):2472-82.