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Query: PB006101 JCVI_PEP_1096697844517 /source_dna_id=JCVI_ORF_1096697844516 /offset=0 /translation_table=11 /length=371 /full_length=371, from HGM_OVER

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst YLISFSFLLYSCDEKPKSGITNPSFLPNASGENNEMLIVMDSTKFKGKIGRELVDIYSSYISGLPQPEPRYDLRYIKPRKFNSILKHAKNIVVAFSLEGNSLDSEILRRNFNSESLDKIQSDSSLFYFVRRNQYARGQVVLYLFSENDDDLYSKIKRNRNSILKFFDDELKKRVDTEIFRKVENNLMDKIFTDHNIKIKIPYGYDLAKSINEENSNFFWLRQLDLEYDKNIFLYYEDYSNSELKNFYDVFNSSDINIKPIRAYISKKYLRDSEKSKIFMDIQDVFPIQSNKINFKGNLAIESRGLWKLSDISAGGPFLSKIIYDSKLKRVYYLEGYVYAPGLKKRGLMQEISSILMTFELast
1 -6.090sp|Q8WZ42|TITIN_HUMAN Titin OS=Homo sapiens GN=TTN PE=1 SV=2  ali   3..............................GNQYLFRVAAENQYGRGPFVETPKPIKALDPLHPPGPPKDLHHVDVDKTEVSLVWNKPDRD------GGSPITGYLVEYQEEGTQDWIKFKTVTNLECVVTGLQQGKTYRFRVKAENIVGLGLPDTTIPIECQEKLVPPS---------VELDVKLIEGLVVKAGTTVRFP-----AIIRGVPVPTAKWTTDGSEIKTDEHYTVETDNFSSVLTIKNCLRRDTGEYQITVSNAA------GSKTVAVHLTVLDVPGPPTGPINILDVTPEHMTISWQPPKDDGGSPVINYIVEKQDTRK.............................. 275
2 -6.050sp|Q8WZ42|TITIN_HUMAN Titin OS=Homo sapiens GN=TTN PE=1 SV=2  ali   11  14.............NKILIADTQMKVSGLDEGLMYEYRVYAENIAGIGKCSKSCEPVPARDPCDPPGQPEVTNIT-------------RKSVSLKWSKPHYDGGAKITGYIVERRELPDGRTNIQETYFEVTELTEDQRYEFRVFARNAADSVSEPSESTGPII-------VKDDVEPPRVMMDVKFRDVIVVKAGEVLKIN-----ADIAGRPLPVISWAKDGIEIEERARTEIISTDNHTLLTVKDCIRRDTGQYVLTLKNVA------GTRSVAVNCKVLDKPGPPAGPLEINGLTAEKCSLSWGRPQEDGGADIDYYIV..................................... 297
3 -5.630sp|Q9UQP3|TENN_HUMAN(removed signalp:1-23) Tenascin-N OS=Homo sapiens GN=TNN PE=1 SV=2  ali   1..........ACSGHGRCVDGRCLCHEPYVGADCGYPACPENCSGHG-------ECVRGVCQCHEDFMSEDCSEKRCPGDCSGH-----GFCDTGECYCEEGFTGLDCAQVVTPQGLQLLKNTEDSLLVSWE--VDHYLLSYYPLGKELSGKQIQVPKEQHSYEILGLLPGTKYIVTLRNVKNEVSSSPQHLLATTDLAVLGTAWVTDETENS--DVEWENPSTEVDYYKLRYGPMTGQEVAEVTVPKSSDPKSRYDITTEYKITVVPMRGELEGKPILLNGRTEIDSPTNVVTDRVTEDTATVSWDPVQ----AVIDKY....................................... 300
4 -5.620sp|Q8WZ42|TITIN_HUMAN Titin OS=Homo sapiens GN=TTN PE=1 SV=2  ali   10.............NKMPVKDTTYRVKGLTNKKKYRFRVLAENLAGPGKPSKSTEPILIKDPIDPPWPPGKPTVKDVGKT----------SVRLNWTKPEHDGGAKIESYVIEMLKTGRVAEGVPTTQHLLPGLMEGQEYSFRVRAVNKAGESEPSEPSDPVLC--------REKLYPPSPPRWLEVINITKNTADLKWTVPENYIVEKRDVRRKG---WQTVDTTVKDTKCTVTPLTEGSLYVFR------------VAAENAIGQS--YTEIEDSVLAKDTFTTPGPPYALAVVDVTKRHVDLKWEPPKNDGGRPIQRYVI..................................... 297
5 -5.510sp|Q8WZ42|TITIN_HUMAN Titin OS=Homo sapiens GN=TTN PE=1 SV=2  ali   10  3.......................KVTGLTENSDYQYRVCAVNAAGQGPFSEPSEFYKAADPIDPPGPPAKIRIADSTKS----------SITLGWSKPVYDGGSAVTGYVVEIRQGEETKGEVRTTEYVVSNLKPGVNYYFRVSAVNCAGQGEPIEMNEPVQAKDILEAPEIDLDVALRTSVIAKAGEDVQVLIPFKGRPPPTVTWRKDEKNLGSD--RYSIENTDSSSLLTIPQVTRNDTGKY------------------ILTIENGVGEPKSSTVSVKVLDTPAACQKLQVKHVSRGTVTLLWDPPLIDGGSPIINYVIEKRDATK.............................. 286
6 -5.510sp|Q8WZ42|TITIN_HUMAN Titin OS=Homo sapiens GN=TTN PE=1 SV=2  ali   3.............NKTPIRMRDFKVTGLTEGLEYEFRVMAINLAGVGKPSLPSEPVVALDPIDPPGKPEVINIT-------------RNSVTLIWTEPKYDGGHKLTGYIVEKRDLPSKS------MKANHVNVPECAFTVTDLVEGGKYEFRIRAKNTAGAISAPSESTETIICKDEYEAPTIVLDPTIKDGLTIKAGDTIVLNAISILGKPLPKSSWSKAGKDIRPSDITQITSTPTSSMLTIKYATRKDAGEYTITATNPFGT-----KVEHVKVTVLDVPGPPGPVEISNVSAEKATLT--WTPPLEDGGSPIKSYILEKRETSR.............................. 293
7 -5.480sp|Q9Y6Q1|CAN6_HUMAN Calpain-6 OS=Homo sapiens GN=CAPN6 PE=2 SV=2  ali   1...........................................EWQQ-----LTASDRKNLGLVMSDDGEFWM------SLEDFCRNFHKLNVCRNVNNPIFGRKELESVLGCWTVDDDPLMNRSGYNNRDTFLQNPQYIFTVPEDGHKVIMSLQQKDLRTYRRLFKVEMNRKFRLHHLYIQERAGTSTYIDTRTVFLSKKGNYVLVPTMFQHGRTSEFLLRIFSEVPVQLRELTLDMPKMSCWNLARGYPKVVTQITVHSAEDLEKKYANETVNPYLVIKCGKEEVRSPVQKNTVHAIFDTQ----------------AIFYRRTTDIPIIVQ--VWNSRKFCDQFLGQVTL...... 298
8 -5.170sp|P0C221|CN038_HUMAN Uncharacterized protein C14orf38 OS=Homo sapiens GN=C14orf38 PE=2 SV=1  ali   11  66..............TTELKEEEKAFVNKEKMLMKELSKYEEIFVKETQINKEKEEELVEYLPQLQVAEQEYKEKRRKLEELSNIIRQEEDLLNNHIFLFTRDFSRYISQQLRDQESKKNKDHFETLKNLENGFYINDQKADLLLLEN-KKLKEYILYLKNNIEKYREGQEALMHTSSDLSRQLIAQEAQYKDLWAEFQTTVKILV.......................................................................................................................................................... 267
9 -4.940sp|Q6V1X1|DPP8_HUMAN Dipeptidyl peptidase 8 OS=Homo sapiens GN=DPP8 PE=1 SV=1  ali   12  36......................................................................................TANPKVTFKMSEIMIDAEGRIIDVIDKELIQPFEILFEGVEYIARAGWTPEGKYAWSILLDRSQTRLQIVLISPELFIPVEDDVMERQRLIESVPDSVTPLIIYEETTDIWINIHDIFHVFPQSHEEEIEFIFASEC-------------------------------------KTGFRHLYKITSILKESKYKRSSGGLPAPSDFKCPIKEEIAISGEWEVLG-RHG----SNIQVDEVRRLVYFLEHHLYVVSYVNPGEVTRLT....... 267
10 -4.880sp|Q8WZ42|TITIN_HUMAN Titin OS=Homo sapiens GN=TTN PE=1 SV=2  ali   3..................................EFKVSAENIVGIGKPSKVSECFVARDPCDPPGRPEAIVIT-------------RNNVTLKWKKPAYDGGSKITGYIVEKKDLPDGRTNVLETEFTVSGLVEDQRYEFRVIARNAAGNFSEPSDSSGAIT-------ARDEIDAPNASLDPKYKDVIVVHAGETFVLE-----ADIRGKPIPDVVWSKDGKELEETAARMEIKSTIQKTTLVVKDCIRTDGGQY-----ILKLSNVGGTKSIPITVKVLDRPGPPEGPLKVTGVTAEKCYLAWNPPLQDGGANISHYIIEKRETSR.............................. 273

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 5 5 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Rychlewski L, Godzik A. Improving the quality of twilight-zone alignments. Protein Sci. 2000 Aug;9(8):1487-96.