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Query: PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991;, from HGM_OVER

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MEGHEEVRTGWSRWDSLWPFLLFYCNFLKGVFLLRIAVVDGQGGGIGKHITARLRQELPPEVEILALGTNAAATVAMIKAGANEGATGERAIIYNAPRVEAITGSLAIILADAMLGELTPAMAAAIAASPARKFLLPINRSGVEVIGVTPEPLPHLIEALVNRVKFFYQEGGDKDLast
1 -9.230sp|Q4KMG9|CL059_HUMAN(removed signalp:1-24) Uncharacterized protein C12orf59 OS=Homo sapiens GN=C12orf59 PE=2 SV=1  ali follow..  14  13...........TDWVHLW-ALLLLCGLTSLCFRCEVTVIAFDHDSTLQSTITSLQSVFGPAARRILAVAHSHSSLGQLPSSLDTLPGYEEALHMSRFTV............................................................................ 125
2 -9.090sp|Q13748|TBA3C_HUMAN Tubulin alpha-3C/D chain OS=Homo sapiens GN=TUBA3C PE=1 SV=3  ali follow..  13  120....DRIRKLADLCTGLQGFLIFH------------SFGGGTGSGFASLLMERLSVDYGKKSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNA..... 294
3 -9.050sp|Q9H853|TBA4B_HUMAN Putative tubulin-like protein alpha-4B OS=Homo sapiens GN=TUBA4B PE=5 SV=2  ali follow..  10  59....DRIRKLADQCTGLQGFLVFH------------SLGRGTGSDVTSFLMEWLSVNYGKKSTAMVQPYNSILTTHTTLEHSDCAFMVDNKAIYDICHCNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVLVSYLTSTSPWPPMHQSSLQKRYTTSSCWWQRLPMPA.... 234
4 -9.040sp|Q6PEY2|TBA3E_HUMAN Tubulin alpha-3E chain OS=Homo sapiens GN=TUBA3E PE=1 SV=2  ali follow..  13  120....DRIRKLADLCTGLQGFLIFH------------SFGGGTGSGFASLLMERLSVDYSKKSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNA..... 294
5 -9.010sp|P68363|TBA1B_HUMAN Tubulin alpha-1B chain OS=Homo sapiens GN=TUBA1B PE=1 SV=1  ali follow..  13  120....DRIRKLADQCTGLQGFLVFH------------SFGGGTGSGFTSLLMERLSVDYGKKSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNA..... 294
6 -8.950sp|P68366|TBA4A_HUMAN Tubulin alpha-4A chain OS=Homo sapiens GN=TUBA4A PE=1 SV=1  ali follow..  13  120....DRIRKLSDQCTGLQGFLVFH------------SFGGGTGSGFTSLLMERLSVDYGKKSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNA..... 294
7 -8.950sp|P68371|TBB2C_HUMAN Tubulin beta-2C chain OS=Homo sapiens GN=TUBB2C PE=1 SV=1  ali follow..  14  118....DVVRKEAESCDCLQGFQLTH------------SLGGGTGSGMGTLLISKIREEYPDRIDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNAMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ..... 292
8 -8.900sp|Q71U36|TBA1A_HUMAN Tubulin alpha-1A chain OS=Homo sapiens GN=TUBA1A PE=1 SV=1  ali follow..  13  120....DRIRKLADQCTGLQGFLVFH------------SFGGGTGSGFTSLLMERLSVDYGKKSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNA..... 294
9 -8.890sp|P04350|TBB4_HUMAN Tubulin beta-4 chain OS=Homo sapiens GN=TUBB4 PE=1 SV=2  ali follow..  14  118....DVVRKEAESCDCLQGFQLTH------------SLGGGTGSGMGTLLISKIREEFPDRIDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNAMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ..... 292
10 -8.880sp|Q9BQE3|TBA1C_HUMAN Tubulin alpha-1C chain OS=Homo sapiens GN=TUBA1C PE=1 SV=1  ali follow..  13  120....DRIRKLADQCTGLQGFLVFH------------SFGGGTGSGFTSLLMERLSVDYGKKSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNA..... 294

FFAS is supported by the NIH grant R01-GM087218-01
1 3 7 7 9 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Sikora S, Godzik A. Combination of multiple alignment analysis and surface mapping paves a way for a detailed pathway reconstruction--the case of VHL (von Hippel-Lindau) protein and angiogenesis regulatory pathway. Protein Sci. 2004 Mar;13(3):786-96. Epub 2004 Feb 06.