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Query: PB017124 _Gut.Meta.Jp.0039711_ gi|162659581|dbj|BAAX01000024.1||2 (+ 385:1498~0 complete), from HGM_OVER

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst ASAQAKQTVKVLEYCPAPGQFTNKLPEINNTMSAEERLKACEEQLEDGNLVCLGAAGGYITVALDQPIKNGKGSDIRILGNAFYSANDPKYGDATIGGSVEPGIVYVGVGSSPETAEWYELAGSEYYTTEMHRFEITYYKPTVETGEIKTPYITIDNYIRWTASWTNPDGSKQTAEGWQPKNVYHKQSYWPAWEENDQITFRGARLPDNAVNYGGDGSDPDNPQYWVSYRYAADSYGYADAAPNSDNVYTTFDLDWAVDSDGNPKHLDHADFIRIQSGVLQQCGWTGETSTEVGRITNLast
1 -7.810sp|O60494|CUBN_HUMAN(removed signalp:1-23) Cubilin OS=Homo sapiens GN=CUBN PE=1 SV=5  ali   11  2........................................................GHTLWVRFIS--------DGSGSGTGFQATFMKIFGN---------DNIVGTHGKVASPFWPENYPHNSNYQWTVNVNASHVVHGRILEMDIEEIQNCYYDKLRIYDGPSIHARLIGAYCGTQTESFSSTGNSLTFHFYSDSISGKGFLLEWFAVDAPDGVLPTIAPGACGGFLRTGDAPVFLFSPGWPDSYSNRVDCTWLIQAPDSTVELNAYDSLVIRDGDNNLAQQLAVLCGR...... 233
2 -6.570sp|Q9Y561|LRP12_HUMAN(removed signalp:1-32) Low-density lipoprotein receptor-related protein 12 OS=Homo sapiens GN=LRP12 PE=1 SV=1  ali   9  2....HSENVHISGVSTACGETPEQIRAPSGIITSPGWPSEYPAKINCSWFIRANP-GEIITISFQDFDIQGSNLDWLIETYKNIESYRACGSTIPPPYISSQDHIWIR---------------HSDDNISRKGFRLAYFSGKSEEPNCACDQFRCGNGKCIPEAWKCNNMDECGDSSDEEICAKEANPPTAAAFQPCAYN---ESLKCDGNIDCLDLGDEIDCDVPTCGQWLKYFYGTFNSPNYPDFYPPGSNCTWLIDGDHRKVILR--DYVKIYDGLEENPHKLLRV......... 299
3 -6.250sp|Q68DQ2|CRBG3_HUMAN Beta/gamma crystallin domain-containing protein 3 OS=Homo sapiens GN=CRYBG3 PE=2 SV=2  ali   11  1..................................SNACGALSSPILSFRYLQANFIESSVTL-FESD--LESGKFIDITNQEISDLEEIGFGSKTRSIHVKSG-VWVAYQQKFFCGEQYILEKGKYKCFF-SNNIIMSIRPIQLEPLGINEPPHLLKAFSKPGFQGECIDFTEETSDLTSLMPCSFKVLRGCWLLYYQEDMFVCVLEEGLYADLTSCGCPASKVKSLKPIDYVFEEPSISLFALEHCEGRELHLEEAVNSVLNKDLHFYTQSVWVKSGAYEGSNFLGR.......... 258
4 -6.220sp|Q9BYH1|SE6L1_HUMAN(removed signalp:1-28) Seizure 6-like protein OS=Homo sapiens GN=SEZ6L PE=1 SV=1  ali   9  10........................................................GQKLHLHFER--LLLHDKDRMTVHSG-QTNKSALLYDSLQTESVPFEGLLSEGNTI-------RIEFTSDQARAASTFNIRFEA---------------------FEKGHCYEPYIQNGNFTTSDPTYNIGTIVEFTCDPGHSLEQGPAIIECINVRDPYWNDTEPLCRAMCGGELSAVAGVVLSPNWPEPYVEGEDCIWKIHGEEKRIFLDNSDILTIYDGDEVMPHILGQYLGN...... 222
5 -6.160sp|Q9GZS0|DNAI2_HUMAN Dynein intermediate chain 2, axonemal OS=Homo sapiens GN=DNAI2 PE=1 SV=2  ali   11  12.............................................DNGCLIACGSQLGTTLLEVSPGLSTLQRNEKNVASSMFERET................................................................................................................................................................................................................... 54
6 -6.120sp|Q7Z408|CSMD2_HUMAN CUB and sushi domain-containing protein 2 OS=Homo sapiens GN=CSMD2 PE=1 SV=2  ali   17  227........................................................................................................................................................................................................................................GEVSGQVLSPGYPAPYEHNLNCIWTIEEAGCTIGLHVHDVLRIWDGPVESGVLLKELS........ 293
7 -6.110sp|Q96PZ7|CSMD1_HUMAN(removed signalp:1-26) CUB and sushi domain-containing protein 1 OS=Homo sapiens GN=CSMD1 PE=1 SV=2  ali   13  1.......................................................................................................................................................................................................RLEGATKLTCLGGGRRVWSAPLPRCVAECGASVKGNEGTLLSPNFPSNYDNTHECIYKIEEAGKGIHLR--DTLKVYDGKDSSSRPLGTFTKN...... 101
8 -6.090sp|Q96PZ7|CSMD1_HUMAN(removed signalp:1-26) CUB and sushi domain-containing protein 1 OS=Homo sapiens GN=CSMD1 PE=1 SV=2  ali   17  231........................................................................................................................................................................................................................................TGPAGVILSPNYPQPYPPGKECDWRVKNPDFVIALISYDFLHIYEGEDSNSPLIGSYQ........ 297
9 -6.070sp|Q7Z407|CSMD3_HUMAN CUB and sushi domain-containing protein 3 OS=Homo sapiens GN=CSMD3 PE=2 SV=3  ali   18  220........................................................................................................................................................................................................................................GESSGRILSPGYPFPYDNNLRCMWMIEDPGNIVSLQSHDILRVWDGPPENDMLLKEISEGIHSTLN 299
10 -6.040sp|Q7Z408|CSMD2_HUMAN CUB and sushi domain-containing protein 2 OS=Homo sapiens GN=CSMD2 PE=1 SV=2  ali   12  53........................................................GFGAHIQFLNFSTEPNHDYIEIRNGPYETSGRFSGSELPSSLLSTSHETTVSQNRPGFKLEYQDLTYSHQISSFLRGFDLSELERTNSTPPVAASYVWDLDPGCEAYELQECPDPEPFANGIVRGAGYNVGQSV-TFECLPGYQLTGHPVLTCQHGTNRNWDHPLPKCEVPCGGNITSSNGTVYSPGFPSPYSSSQDCVWLITVPGHGVRLNSGDFITIWDGPQQTAPRLG........... 300
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.