current user: public
If you have questions about the server, please let us know.

Query: PB044822 Q89ZL7_BACTN/1-147 PB044822; Pfam-B_44822;, from HGM_OVER

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .
# Score Template Links and tools%idFirst MKLSQQSLSTIESAIQKAAGKYVCGCDQTAVTDIHLQPDQTSGQLTIYNDDDEELANVMIEEWATYDGDDFMENVKPNLKSTLCRMKDAGDFDKVTILKPYSFVLVDEDKETVAELLLIDDDTLLVDDELLKGLDKELDEFLKNLLELast
1 -7.780sp|O00469|PLOD2_HUMAN(removed signalp:1-25) Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 OS=Homo sapiens GN=PLOD2 PE=1 SV=2  ali   11  1..........................................EALKLFIHNKEVYHEKDIKVFFDKAKHEIKT---------IKIVGPEENLSQAEARNMGMDFCRQD--EKCDYYFSVDADVVLTNPRTLKILIEQNRKIIAPLV. 93
2 -6.840sp|O60568|PLOD3_HUMAN(removed signalp:1-24) Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 OS=Homo sapiens GN=PLOD3 PE=1 SV=1  ali   13  2..........................................DRVTLFLHNNEVFHEPHIADSWPQLQDHFSAVKLVGPEEALSPGEARDM------------MDLCRQDPECEFYFSLDADAVLTNLQTLRILIEENRKVIAPML. 94
3 -6.670sp|Q02809|PLOD1_HUMAN(removed signalp:1-18) Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Homo sapiens GN=PLOD1 PE=1 SV=2  ali   11  2..............................................LFIHNHEQHHKAQVEEFLAQHGSEYQSVKLVGPEVRMANADARN-----------MGADLCRQDRSCTYYFSVDADVALTEPNSLRLLIQQNKNVIAPLM. 90
4 -6.640sp|Q9NUS5|CT029_HUMAN Uncharacterized protein C20orf29 OS=Homo sapiens GN=C20orf29 PE=2 SV=1  ali follow..  14  92......................................EAPRGAFRLAAENPFQEPRTVV--WLG-DAHENLLLAEGTLRLLTRLLLDH------LLAPSTSLLLRADRIEGILTRFLPHGQLLFLNDQFVQGLEKEFSAAWPR... 200
5 -6.080sp|Q8IYK4|GT252_HUMAN(removed signalp:1-27) Procollagen galactosyltransferase 2 OS=Homo sapiens GN=GLT25D2 PE=1 SV=1  ali follow..  16  51...................................LDYPKSRMAIWAATDHNVDNTTEIFREWLKNVQRLYHYVEWRPMDEPESYPDEIGPKHWPTSRFAHVMKLRQAALRTAREILFIDVDNFLTNPQTLNLLIAENKTIVAPML. 166
6 -6.080sp|Q8IWF6|F116A_HUMAN Protein FAM116A OS=Homo sapiens GN=FAM116A PE=2 SV=1  ali   18  59......................................................LKSPNFDGWFKTRRKEMTQKLEALHLEALCEEDLLLWIQKHT-----EVETVDLVLKLKNKLLQADREHLPVKPDTMEKLRTHIDAIILAL.. 144
7 -6.030sp|Q5HYK7|SH319_HUMAN SH3 domain-containing protein 19 OS=Homo sapiens GN=SH3D19 PE=1 SV=2  ali   21  259..........................................................................................LYSKYMLSVPHGIANEDIVSQNPGELSCKRGDVLV----MLKQTEN........... 300
8 -5.980sp|Q8NBJ5|GT251_HUMAN(removed signalp:1-29) Procollagen galactosyltransferase 1 OS=Homo sapiens GN=GLT25D1 PE=1 SV=1  ali follow..  14  48...................................LRHPRERTALWVATDHNMDNTSTVLREWLVAVKSLYHSVEWRPAEEPRSYPDEEGRYEHVMKLRQAALKSARD--MWADYILFVDADNLILNPDTLSLLIAENKTVVAPML. 163
9 -5.960sp|O00422|SAP18_HUMAN Histone deacetylase complex subunit SAP18 OS=Homo sapiens GN=SAP18 PE=1 SV=1  ali follow..  10  4.....ESRVTQEEIKKEPEKPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVYPEAVFTDVKRPGYRVKEIGSTMSGRKGTDDSMTLQSQKFQIGDYLDIA.................... 136
10 -5.950sp|Q96A98|TIP39_HUMAN(removed signalp:1-30) Tuberoinfundibular peptide of 39 residues OS=Homo sapiens GN=PTH2 PE=1 SV=1  ali follow..  30  31.................................................................................................................RSLALADDAAFRERARLLAALERRLNSYMHKLL. 65
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 1 9   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Multiple flexible structure alignment using partial order graphs. Bioinformatics. 2005 Mar 3;