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current user: public |
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Query: PB045072 _Gut.Meta.Jp.0111663_ gi|163310555|dbj|BABD01000145.1||3 (+ 1662:2028~0 complete), from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . | |||||||
# | Score | Template | Links and tools | %id | First | MRKLGFTLVAALAFSVSAFANNANDTINVAGKWDGTINKAKLTKYLQLSSQQNEQVASICDYFQEQMKVANSSKKNSDQKVRNAVYGNLKLMKNTLTEKQYSDYLRLMALTLRNKGID | Last |
1 | -8.710 | sp|Q96A33|CCD47_HUMAN(removed signalp:1-20) Coiled-coil domain-containing protein 47 OS=Homo sapiens GN=CCDC47 PE=1 SV=1 | ali follow.. | 6 | 374 | ...........................................KKFRLNREGKQKADKNRARVEENFLKLTHVQRQEAAQSRREEKKRAEKERIMEDPEKQRRLEEAALRREQKKLEK | 450 |
2 | -7.550 | sp|P11686|PSPC_HUMAN Pulmonary surfactant-associated protein C OS=Homo sapiens GN=SFTPC PE=1 SV=2 | ali follow.. | 18 | 33 | LKRLLIVVVVVVLIVVVI--------------------VGALLMGLHMSQKHTEMVLEMSIGAPEAQQRLALSEH........................................... | 87 |
3 | -7.180 | sp|Q9H2K8|TAOK3_HUMAN Serine/threonine-protein kinase TAO3 OS=Homo sapiens GN=TAOK3 PE=1 SV=2 | ali | 8 | 168 | ...............................RRQHQKQLIALENKLKAEMDEQKEVETHANNSSIELEKLAKKQVAIIEKEAKVAAADEKKFQQQILAQQKKDLTTFLESQKKQYK.. | 257 |
4 | -7.050 | sp|Q8WUI4|HDAC7_HUMAN Histone deacetylase 7 OS=Homo sapiens GN=HDAC7 PE=1 SV=2 | ali | 6 | 6 | ...................GQRPPVEPPPEPTLLALQRPQRLHHHLFLAGLQQQRSVE-PMRLSMDTPMPELQVGPQEQELRQLLHKDKSKRSAVASSVVKQKLAEVILKKQQA.... | 99 |
5 | -6.970 | sp|Q9UL54|TAOK2_HUMAN Serine/threonine-protein kinase TAO2 OS=Homo sapiens GN=TAOK2 PE=1 SV=2 | ali | 9 | 199 | ...............................RRQHQKQLLALESRLRGEREEQRELEAQRAGFGAEAEKLARRHQAIGEKEARAAQAEERKFQQHILGQQKKELAALLEAQKRTYK.. | 288 |
6 | -6.710 | sp|Q7L7X3|TAOK1_HUMAN Serine/threonine-protein kinase TAO1 OS=Homo sapiens GN=TAOK1 PE=1 SV=1 | ali | 9 | 171 | ...............................RRQHQKQLMTLENKLKAEMDEDKDLETQRNNFAAEMEKLIKKHQAAMEKEAKVMSNEEKKFQQHIQAQQKKELNSFLESQKREYK.. | 260 |
7 | -6.690 | sp|P40818|UBP8_HUMAN Ubiquitin carboxyl-terminal hydrolase 8 OS=Homo sapiens GN=USP8 PE=1 SV=1 | ali | 6 | 1 | .........................................FSPTLMLTDEEKARIHAETALLMEKNKQEKELRERQQEEQKEKLRKEEQEQKAKKKQEAEENEITEKQQKAKEEMEK | 77 |
8 | -6.420 | sp|O94804|STK10_HUMAN Serine/threonine-protein kinase 10 OS=Homo sapiens GN=STK10 PE=1 SV=1 | ali | 14 | 123 | ...............................QKEEHRNQTQLSNKHELQLEQEQEINAKKKFFDTELENLERQQKQQVEKMEQDHAVRRREEARRIRLEQDRDYTRFQEQLKLMKK.. | 212 |
9 | -6.290 | sp|Q9H1C4|UN93B_HUMAN Protein unc-93 homolog B1 OS=Homo sapiens GN=UNC93B1 PE=1 SV=2 | ali follow.. | 7 | 495 | AKLAVLLVTLVAAAVSYLRMEQKLRRGVAPRQPRIPRPQHKVRGYRYLEEDNSDESDAEGEHGDGAEEEAPPAGPRPGPEPAGLGRRPCPYEQAQ-PEEQ.................. | 597 |
10 | -6.120 | sp|Q8IUI8|CRLF3_HUMAN Cytokine receptor-like factor 3 OS=Homo sapiens GN=CRLF3 PE=1 SV=2 | ali follow.. | 6 | 1 | MRGAM--------------------------ELEPELLLQEARENVEAAQSYRRELGHRLEGLREARRQIKESASQTRDVLKQHFNDLKGTLGKLLDERLVTLLQEVDTIEQET.... | 88 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Schwarzenbacher R, Godzik A, Jaroszewski L. The JCSG MR pipeline: optimized alignments, multiple models and parallel searches. Acta Crystallogr D Biol Crystallogr. 2008 Jan;64(Pt 1):133-40. Epub 2007 Dec 5. |