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Query: HGC00106 gi|162841414|dbj|BABA01003295.1|1.0 TMP01000;, from HGM_OVER

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80
# Score Template Links and tools%idFirst LEDGDFVKLSNLTIGYTLPIRNNKYMKSLRVYVSGNNLFCITGYSGLDPELDISNVQAPGVEYRDTYPTTRSFTFGVNIGFLast
1 -65.300HGC00106 gi|162841414|dbj|BABA01003295.1|1.0 TMP01000;  ali  100  1LEDGDFVKLSNLTIGYTLPIRNNKYMKSLRVYVSGNNLFCITGYSGLDPELDISNVQAPGVEYRDTYPTTRSFTFGVNIGF 81
2 -2.680PB017610 Q11T14_CYTH3/22-188 PB017610; Pfam-B_17610;  ali follow..  18  27VKTHSSLRAENLEVHTHAHDPHKSSYKILHVFMLVSSDPSVTGYKSVDPHGVDIYDPAAGGGLFNLNGKETPYTFKVSTKL 127
3 -2.530PB000716 Q60CS7_METCA/1-294 PB000716; Pfam-B_716;  ali follow..  11  23.HGAEYWSARELQLGYSQWRRFEQAIERAITSCKESGNSPEHHFAGAGKPITGGKGAVQVVD---DYHLSRCYLIAQN... 100
4 -2.480PB062605 Q9F6T7_BACTN/1-105 PB062605; Pfam-B_62605;  ali follow..  22  53.........................FAVLALYTFGRAAYDIGRNDGSRMETG............................. 79
5 -2.390PB008806 Q5L9W8_BACFN/1-127 PB008806; Pfam-B_8806;  ali follow..  14  84........................................LNQSVRMKQRQKIVRVQSSNDSILLDFSKKVKFNAALNLAF 124
6 -2.370PB044863 Q5LB69_BACFN/1-105 PB044863; Pfam-B_44863;  ali follow..  25  14..............................MEISEENLVTIEKYSLFQHLIDSNGIVDEAV.................... 44
7 -2.270PB002104 Q72PH8_LEPIC/1-220 PB002104; Pfam-B_2104;  ali follow..  11  6.EKIQFSKIRSRSCPFMQQNKFRKAIVAILMPMILVVSFGFGKFAIVKKVYEVNDGFNIGSGLLAKFIKTLVMYFPFSILY 87
8 -2.000HGC00579 gi|163284429|dbj|BABD01026259.1|2.0 TMP00679;  ali follow..  135.......RMLLVKVTYGMDFGRKRKTAAKRI.................................................. 158
9 -1.870HGC00429 gi|162734516|dbj|BAAZ01029480.1|1.0 TMP00411;  ali follow..  14  1........MLKENQGYVI--RRTILFDNQCGFALGENSRAPNPF..................................... 34
10 -1.820PB144506 _Gut.Meta.Jp.0101058_ gi|162866171|dbj|BABB01003836.1||1 (- 121:946~0 complete)  ali follow..  12  91......IKSNNGRLAIRIQDGTRIKPTQYVIEGSSKTLKYLKAFSEDQLEIKISGSSDVKFPHNVKLRLGEFSVSG..... 171

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 6 1 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40.