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Query: HGC00166 gi|163579340|dbj|BABE01005762.1|1.0 TMP00473;, from HGM_OVER

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKEHKEVSALLQQAKQERRCCYGTSDAQRRALKRRLHAGELVSPYKNLYADRTLWNTMTREQQSLQVIRALSAIHPQWVFAGLSAACVYGLQHNYSLHDGTVHIASKSGIGGGDEARLNRIYINRIPTRKHNGILLTTPARTLLDCAVFPFPQALPIYDSALRKSLTTIEEVQSLMIQSVCDEVSVTKLLKYANPLSENGGESLMRGQITELSFGSSCWQCSSLast
1 -108.000HGC00166 gi|163579340|dbj|BABE01005762.1|1.0 TMP00473;  ali  100  1MKEHKEVSALLQQAKQERRCCYGTSDAQRRALKRRLHAGELVSPYKNLYADRTLWNTMTREQQSLQVIRALSAIHPQWVFAGLSAACVYGLQHNYSLHDGTVHIASKSGIGGGDEARLNRIYINRIPTRKHNGILLTTPARTLLDCAVFPFPQALPIYDSALRKSLTTIEEVQSLMIQSVCDEVSVTKLLKYANPLSENGGESLMRGQITELSFGSSCWQCSS 223
2 -13.200PB001025 Q1QFV3_NITHX/1-288 PB001025; Pfam-B_1025;  ali follow..  10  20PDLKTAMLGRIRADEP---VDLASRDAVDKTLQRLTKAEALRRIDRGLYDQPGF-QKPNPPDPRSVIDAVGRRDQTRMLVDGMTAANDLGL-TDAVPAKIVVHTDARRRAIKLGNATITFRPTAASKLFWAGQALHWLRDLLVRDGESEQIQRKLAKLFEDPAVGPPLKADLAAGMTALPTWMLVLKPLIETDPDDRGQHPDNVHAAA............... 243
3 -3.950PB162065 _Gut.Meta.Jp.0089312_ gi|162832207|dbj|BABA01012502.1||1 (- 0:1326~0 complete)  ali follow..  10  130............................DRQFLEAIKEVSARRMISTYYLMGEGFSGAESGKSWMNLSLKQLCAMKRHVFAGQNGACYHSFDQGSFGRKPGFIAANAGLLTKDIYLRSVHKHAPQKLILAAAGTP----AVSRKAIIIDGQEQLIIRMRDPLTNFEQTVVMTLDALPQRPPKTTKLLIETSFQS-------ETDCHIRVTDMGF......... 311
4 -3.880HGC00921 gi|162841401|dbj|BABA01003308.1|3.0 TMP01242;  ali follow..  8.............................................................................................................NTDQARIRALKTAVVKGDMCDVYDLPVSLKTLGEARIFLSKFETAHSYYVHCYGEQSRNSKKHQANVKTARLYISHFIQVLNLAVIRMEIKESHKALYGLPVDNFSVPDLSSEA 121
5 -3.680PB177066 Q891G9_CLOTE/1-159 PB177066; Pfam-B_177066;  ali follow..  1..................................................................................................................................MTVLSLKEVKLLMNDTQKNDLFYVCCLIEFIGRKTKNRRSIIVQKL-----GKKELIRQLDIAEANHCLSFEQVSDEIIEYFNIQEGDFHTVE 88
6 -2.950PB038401 Q8RFH0_FUSNN/1-210 PB038401; Pfam-B_38401;  ali follow..  10  1...............................................................................................................................................MDIGPCSIPTGFLVGDPLVYLGSKYEKEYFQKIP---TGEFRTEICVVKASDGDCD---AAVRLKFND............ 65
7 -2.850HGC00915 gi|162810474|dbj|BABA01034235.1|2.0 TMP01234;  ali follow..  1MSKKKRGEERMKE---------------EDNILKKVGKKNSFKVPEGYFLTSEVMGKLPEKEGPAFEEVKQPMMWIRMKPLLYMAAMFIGA.................................................................................................................................... 78
8 -2.430PB047024 _Gut.Meta.Jp.0098985_ gi|162869273|dbj|BABB01000734.1||6 (+ 5047:5650~0 complete)  ali follow..  105....................................................................................................................................KMPIRYVCEMFIDRVSASKNYQKEKYTDKSALEYYEKSVDHYMIHPDTK--AMLEYLLVMLSVKGEEYTYSYIKKEVLKGHIP........ 185
9 -2.180PB062763 Q9F6U5_BACTN/1-245 PB062763; Pfam-B_62763;  ali follow..  144...........................................................................................................................DEPGKGQASGSAFEDID-MAVRTIKKDSPSEAEMRHAGKVMTELDGTELYSRITERLTDEPMSERLAKAMAVFVDTVNTTVAQ................. 225
10 -2.090HGC00803 gi|163280588|dbj|BABD01030100.1|2.0 TMP01051;  ali follow..  14  32..............................................................................................................................................LVDKVK----DELQKVIDLLESGETDTEVIQETLDEAVCGINDLQEEFDENDSEIETVADCIGVTVAYILEWFGIPIDIEE 109

FFAS is supported by the NIH grant R01-GM087218-01
1 3 9 5 6 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Comparative analysis of protein domain organization. Genome Res. 2004 Mar;14(3):343-53.