current user: public |
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Query: HGC00374 gi|162831834|dbj|BABA01012875.1|1.0 TMP00304;, from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 | |||||||
# | Score | Template | Links and tools | %id | First | VKVEVHYFDELLERIRDIRASEKRVYRKVKEIFALSVDYDSKSQVAQSFFKSVQNKLEYAATGHTAPELIAKRADASKDNMGLTSFKGVKVRRGDVTVAKNYMTHEEISTLNLIVNMYLDYAELQAKGHIPMHMADWESKLGDFLRFNGREVLENFGTVKREVAEKLALEQYEQYDTHRRALEAADDVDELTADVKRLKR | Last |
1 | -106.000 | HGC00374 gi|162831834|dbj|BABA01012875.1|1.0 TMP00304; | ali | 100 | 1 | VKVEVHYFDELLERIRDIRASEKRVYRKVKEIFALSVDYDSKSQVAQSFFKSVQNKLEYAATGHTAPELIAKRADASKDNMGLTSFKGVKVRRGDVTVAKNYMTHEEISTLNLIVNMYLDYAELQAKGHIPMHMADWESKLGDFLRFNGREVLENFGTVKREVAEKLALEQYEQYDTHRRALEAADDVDELTADVKRLKR | 200 |
2 | -3.730 | PB011051 Q8A0P0_BACTN/1-227 PB011051; Pfam-B_11051; | ali follow.. | 16 | 39 | ........QAVIARLIDIRKAQQEYRSLHHGMYTEHFD.................................................................................................................................................................. | 68 |
3 | -3.510 | HGC00915 gi|162810474|dbj|BABA01034235.1|2.0 TMP01234; | ali follow.. | 21 | 31 | ....EGYFENLTSEVGKLPEKEG................................................................................................................................................................................. | 50 |
4 | -2.980 | PB023890 Q7MUU3_PORGI/1-263 PB023890; Pfam-B_23890; | ali follow.. | 8 | 31 | ........KEFIGRTAKSLSLALAIFSGC--SVLPAWSQEIVAGELERCFLAMPESVLPIVTMEERNDLCRRAGHLSGFTHTASL-ESSLGGTVTFLLNRNFIGEVFMRILSSVICVVTTVLHPVADSRIDFYTTEWKP............................................................. | 173 |
5 | -2.620 | HGC00921 gi|162841401|dbj|BABA01003308.1|3.0 TMP01242; | ali follow.. | 8 | 49 | .......FETAHSYYVHCYGEQSRNSKKHQANVKTARLYISHFIQVLNL-AVIRMEIKESHKALYGLPVDNFSVPDLSSEASLAEWGQKIIEGERKRTSQIPIYNPTIAKVKVHYDIFMEGYEKQLTNRSLEQLASMRVQADRLILDIWNQVEAKFQDVSPNEKRLEKCRDY-IIIIGPEKNRIRRFFKICLSI-KSLQK | 254 |
6 | -2.470 | PB002589 gi|91201099|emb|CAJ74158.1| hypothetical protein [Candidatus Kuenenia stuttgartiensis] | ali follow.. | 8 | 41 | ...GPDFKHAE------FFLEGKGLIRGSVEIHVFASDWIHHKHENQKTYDAV---LHVVMWNDLKGRCVKNFSGKVIPQITLSLYLEAELDEIIETIDVGSYIGNK-NLEMRKQKITQQWIGGFLDYAGDERILQKAKKYEKWIENKPFEIMESLGYKNNKKPFLMLASLVT-AETIQSFVPEYTPAQEKKIIAQSL.. | 238 |
7 | -2.310 | PB012386 gi|82541244|ref|XP_724876.1| blood-stage membrane protein Ag-1 [Plasmodium yoelii yoelii str. 17XNL]gi|23479680|gb|EAA16441.1| blood-stage membrane protein Ag-1 [Plasmodium yoelii yoelii] | ali follow.. | 8 | 32 | .......VQDISEDLIKIELNQNVSINKIFNILKASQASENTQNLRKK----------------------------HAPIKVLINRKNFNLYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFDTNESDKIKGDKNYYNSLENFEGYSYKKIYDNLREATKHENSHFQHDEEILFHSSDANTNKESLYELTENELKNIKK | 205 |
8 | -2.270 | PB000119 Q6KIT1_MYCMO/1-381 PB000119; Pfam-B_119; | ali follow.. | 13 | 217 | ....NSTFLNLAQRINTIRPNPNPNPNEIFNFDLNNLPIENGLLTVEAIW--LQSKMELT---DTATVIIINNTAYVNINKNSVKHNNFAVNYLKSEENNWYLTGRDFPLLGLFVEKFF--------KDDVEVFSPKIPALYFVVNNSTKNIFSSVGISSLSTNNPKLIFTFT........................... | 375 |
9 | -2.150 | PB034883 _HOMD.0130261_ bfor_c_1_4664 Tannerella forsythia ATCC 43037 [1809083 - 1810348] ORF | ali follow.. | 9 | 130 | .................................................................................................................FIGYFREAMYKRHKNSSTSILVNWKRAMDFLKMYAGENL-------PFFKIDNAFAEEYKRF......................... | 184 |
10 | -2.070 | PB013946 A7ABR4_9PORP/121-442 PB013946; Pfam-B_13946; | ali follow.. | 10 | 143 | .....DYLRMLKKLGQDLRNPKNICPEDFMDNATRKIEAIHEKERAAEQRRWEIERREREQQRQLQRKKDAEDFIANKSKFFGLVITDEEIIVKVLESIDEYY--NEGKTQGICVFGSGYYKKADTL----LSARIGDEIIETVVDLRTLEVVQCHGKHNQDTEYHERIIDLNKNANLIRERMKA............... | 322 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Shiryaev SA, Ratnikov BI, Chekanov AV, Sikora S, Rozanov DV, Godzik A,Wang J, Smith JW, Huang Z, Lindberg I, Samuel MA, Diamond MS, Strongin AY. Cleavage targets and the D-arginine-based inhibitors of the West Nile virus NS3 processing proteinase. Biochem J. 2006 Jan 15;393(Pt 2):503-11. |