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Query: HGC00422 gi|163631722|dbj|BABG01004545.1|2.0 TMP00397;, from HGM_OVER

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MIMNATDWNTALFEKMSDEQDKFRDWLKSQPPEEILHHTYEYTVREDIVMAMEQLELTDAQAQALLDSPTPLADVYRYFEKLETGHMDVIRDSIENRADDVCRAKEELRTTPIYPHSAAYAREHGELEQYRASNNVNRQCKESIEAAVREHFDGMYLSHDAAKGVIETYGMERVSMVLSNTVQLQDWDGRYSRRNKEWAKTIPNDNPETVRCGYALNSHPAVLDGFIDLVREEQQRSRTQREKLEPSRPSVRDKLKQELPAHKSAAPKKREPERLast
1 -121.000HGC00422 gi|163631722|dbj|BABG01004545.1|2.0 TMP00397;  ali  100  1MIMNATDWNTALFEKMSDEQDKFRDWLKSQPPEEILHHTYEYTVREDIVMAMEQLELTDAQAQALLDSPTPLADVYRYFEKLETGHMDVIRDSIENRADDVCRAKEELRTTPIYPHSAAYAREHGELEQYRASNNVNRQCKESIEAAVREHFDGMYLSHDAAKGVIETYGMERVSMVLSNTVQLQDWDGRYSRRNKEWAKTIPNDNPETVRCGYALNSHPAVLDGFIDLVREEQQRSRTQREKLEPSRPSVRDKLKQELPAHKSAAPKKREPER 274
2 -4.430PB006205 Q3F123_BACTI/1-181 PB006205; Pfam-B_6205;  ali follow..  8  79.............................................................................................................................................................................IPLFLVWGADKYKTDGKFRLRKHQSSRLVNVPKLKKHVFYGHV------------CVQHDVKDLPIVHSFSEEENDIHAYDVTFLPQKEEVEYVEKDEQTT 178
3 -3.770PB008694 Q9F6U1_BACTN/1-190 PB008694; Pfam-B_8694;  ali follow..  16  1................................................................................................................................................................................MLRRSVPKSIW--RFTVWRRSWAAT-SKPPSGNLPKSGETRKQPTIKNEFINEKRKMRMNLPKVK................................. 72
4 -3.030PB006154 _JGI.0331794_ 2004021056 [Human Gut Community Subject 7]  ali follow..  11  113......................................................................................................................................................................................................................................KEVEEIVRLSQKEKSGEKNIHNAGGVKQSRPDGSKGNRKKRP.. 154
5 -2.890HGC00429 gi|162734516|dbj|BAAZ01029480.1|1.0 TMP00411;  ali follow..  10  5....................................NQGYVIRRTILF----------DNQCGFALGENSRAPNPFVTWQNEPDMAERDLLNRARDYQRRYHVEEVEQAPDKETYLYYSTQRPIDIGTYPNSYFNDLYFTRQQVTGEIFQAWGAITYAHPLTEREMQDYELRPS----RNNLDIRRQMDAQAQVVGKWEDAHHVPDQKRLTWFY-VVKEYVTPDQLAVRVRSIERQEAARAHKEAKRQPPIAEQLKREAQGHRGPELPKRSP.. 255
6 -2.460HGC00593 gi|162858151|dbj|BABB01011554.1|1.0 TMP00709;  ali follow..  14  1MDMTDNNDDVLVKKRIDVPDDGFSRRVMRRLPDR................................................................................................................................................................................................................................................ 39
7 -2.060PB047496 gi|150008556|ref|YP_001303299.1| hypothetical protein BDI_1942 [Parabacteroides distasonis ATCC 8503]gi|149936980|gb|ABR43677.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503]  ali follow..  9  80...........................................................................................................................................AATEAEKKMKEYCAKVGIVEGVFNYVFNSDS------TFTSALKRGSLKGTYSVSPEDKTVTLRYTVGNKKLTVSTLTAHVVLSGNELTLLFNADKLLKFLSTVSSISSNTTLKAINK................. 191
8 -1.970HGC00962 gi|162759780|dbj|BAAZ01005693.1|3.0 TMP01305;  ali follow..  8  80..LHAERTGAYLPRALQGVLEGTLGVFGERLGRLLLKLAVEHNMTNHLLG--GDMDMTRDEYSKM................................................................................................................................................................................................................. 140
9 -1.960PB028090 gi|167758043|ref|ZP_02430170.1| hypothetical protein CLOSCI_00381 [Clostridium scindens ATCC 35704]gi|167663940|gb|EDS08070.1| hypothetical protein CLOSCI_00381 [Clostridium scindens ATCC 35704]  ali follow..  15  29...............................................................................................................................ELARRTKVGGIFCFLIVPAALTVYFAEWALNNPTYVHMNSWFHYAKLYAATAGCIGFMMLKYKWKIGKTNWFKVFPF---------VAINILIAVVSDF................................................ 130
10 -1.960PB009671 Q5LCM2_BACFN/1-111 PB009671; Pfam-B_9671;  ali follow..  9  43.KITVKELPQVVKSTLSKDYEGTIVKEAFVAEKE--GKVYKIIVTA.................................................................................................................................................................................................................................... 86
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.