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Query: HGC00573 gi|163306732|dbj|BABD01003960.1|2.0 TMP00669;, from HGM_OVER

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .
# Score Template Links and tools%idFirst MAQQKNEVQSLLEKAMFQATVADFWMAGLELGVIKTNQRDEASPKEVCSGIPQFIIGVKGLAGFLGTSVSTVNRWKACGLLDDATLQCGKVVIFELPKVIEILRVSDKKNKFNVKSKKYNGKESNLast
1 -65.900HGC00573 gi|163306732|dbj|BABD01003960.1|2.0 TMP00669;  ali  100  1MAQQKNEVQSLLEKAMFQATVADFWMAGLELGVIKTNQRDEASPKEVCSGIPQFIIGVKGLAGFLGTSVSTVNRWKACGLLDDATLQCGKVVIFELPKVIEILRVSDKKNKFNVKSKKYNGKESN 125
2 -3.920HGC00870 gi|163286116|dbj|BABD01024572.1|2.0 TMP01154;  ali follow..  12  40...........LHVRLRRVAKEDYVQPLGALAGVKDIPRIEETYEGDELSDTLFVFA-NRLNQALA-------ALRKSGAGTFPYKAI-TNQNWNALQCFSEIRREHETIQKQLKGNKEQAEE.. 149
3 -3.010PB035451 Q3Z7G7_DEHE1/1-135 PB035451; Pfam-B_35451;  ali follow..  11  100.........................................................................................QPVIFKIERIDI--ENEEEREWLEKQNFKNTVDDA. 133
4 -2.780PB019278 gi|154508461|ref|ZP_02044103.1| hypothetical protein ACTODO_00960 [Actinomyces odontolyticus ATCC 17982]gi|153798095|gb|EDN80515.1| hypothetical protein ACTODO_00960 [Actinomyces odontolyticus ATCC 17982]  ali follow..  9  1MDTIDNFLDAMFAPYPASTRLTDAKVELRAMMEDAYADAIASTHNEAVGRVITDFGNLQEIAPVLGIADDLTAA-AAPAPAGTEGVGAPSRPRVTLPEAQELAEARRRGAA.............. 119
5 -2.520PB001025 Q1QFV3_NITHX/1-288 PB001025; Pfam-B_1025;  ali follow..  7  15...............................MKSDSPDLKTAMLGRIRADEPRKVWTPSDFVDLASRDAKTLQRLTKAEAL----RRIDRGLYDQPG............................ 78
6 -2.370HGC01024 gi|162869036|dbj|BABB01000971.1|4.0 TMP01399;  ali follow..  9  24............QVPENIIQPDRMENILYDYLSISMGNNLSYSDNYQKEAYKNYVFEKHHITE-AEFDSSMVWYTRHTEELASLYKKLGERFRSEKKHMQELLALRENKPAVSLPGDTVD..... 131
7 -2.140HGC01215 gi|162843249|dbj|BABA01001460.1|3.0 TMP01713;  ali follow..  5  77LAGMGGQLHSLTYSRIQRISTTEYIFSLKDWIDKLAQRAAVLSLHREKLYDATAYYRCQPVCEYYIFTLRRI..................................................... 148
8 -2.130PB006154 _JGI.0331794_ 2004021056 [Human Gut Community Subject 7]  ali follow..  21  8.....RDLTKVKSKVMFNLTKRQLICFG................................................................................................. 30
9 -2.070PB003564 gi|46242789|gb|AAS83494.1| TraD [Bacteroides fragilis]  ali follow..  6  116.................QVPEDKLDETFTSIPPSELEYGEDKPEDEEPDKKQASGSSFEDIDMAVHTIWKESPSDEEMRHAGKVMTELDGTELFTSERLAKAMAVFVDTVNMTVTQQKEKVFVIP 234
10 -2.020PB039305 _Gut.Meta.Jp.0057508_ gi|162726131|dbj|BAAY01002830.1||2 (- 1092:1581~0 complete)  ali follow..  15  99.........................................................LVAVQKYFTFPPVADDQ-IAYFAMDGESYPDEKVVIFAVADASKGVSGKRGPRK.............. 151
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Lukasz Jaroszewski, Zhanwen Li, S. Sri Krishna, Constantina Bakolitsa, John Wooley, Ashley M. Deacon, Ian A. Wilson, Adam Godzik, Exploration of Uncharted Regions of the Protein Universe. Plos Biology. 2009 Sep. 7(9):e1000205