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Query: HGC00672 gi|162843654|dbj|BABA01001055.1|4.0 TMP00845;, from HGM_OVER

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MAHRLNTNKQFMVGNGILAFAVIFVVVIFVYMSMRLQQQKAENRNFIETYTITLTKGFAGDSTSIFINDSLLVNRTMTEEPFILEVKRFAEQSALMIVNNATEKLSLFELSEQGGEYRFEKEGEEVKPTGAGIKKLSKECCQTLSTFILFFLTSILast
1 -110.000HGC00672 gi|162843654|dbj|BABA01001055.1|4.0 TMP00845;  ali  100  1MAHRLNTNKQFMVGNGILAFAVIFVVVIFVYMSMRLQQQKAENRNFIETYTITLTKGFAGDSTSIFINDSLLVNRTMTEEPFILEVKRFAEQSALMIVNNATEKLSLFELSEQGGEYRFEKEGEEVKPTGAGIKKLSKECCQTLSTFILFFLTSI 155
2 -4.750HGC00485 gi|163636056|dbj|BABG01000217.1|3.0 TMP00523;  ali follow..  14  1...................................................MIMNPNILNKNPLMFFDRAVNAQRSQLLTVMADAVSECRTAADQAAELNETGQVGLLRLAEVWSAIRAKEGMGGLILEGTEAKILSDVVAQFYAYLSG...... 98
3 -4.000PB001934 Q6PSL5_CHLRE/821-1150 PB001934; Pfam-B_1934;  ali follow..  13  81.........QAQVMEEAIRHWATVLSVRLDLDAARGKLGPEACEMERQRFDGVIAMMERNDGPTLVVTDSQAIDVVHPWTL--------DRSSGRPLVPITTFSIAMAYQQNGGRLDPFVEGLEALETLQDGDRVLISEACN............. 205
4 -3.170PB012823 Q5LCS8_BACFN/1-272 PB012823; Pfam-B_12823;  ali follow..  6  2..HKIKQMIKY----------IATLLLTVLFVACNNGKGQQPSEENEDPKAKEILQGIETETPLMRIIGDTIYYSDAQSAPVYFKIL----KDTLYTYGKDVTHYQIDKQSEY.......................................... 102
5 -3.160PB048631 gi|160885545|ref|ZP_02066548.1| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483]gi|156109167|gb|EDO10912.1| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483]  ali follow..  19  1MKIKF------------LSFIASFFMVSFVITSCLDDDNNIEYSPDATIHAFALDT-FTIDQLSIYNEDSLPVHADT--IIDKILIKTLTTASGVVTMKDKSGNDSVININDS.......................................... 107
6 -2.620PB042013 A7V626_BACUN/1-162 PB042013; Pfam-B_42013;  ali follow..  12  4................NYFFTMLAAVLLAVAGANAQESAEFRPAELAGIWQLCHYVSEIPDTFKVLSDDGRIVNFTMIPGKDAIITGTYQQLTDNSYKESIEKNIHLPMLDHKDNILEFEIGDDGVMYLKY........................ 129
7 -2.530HGC00947 gi|162844524|dbj|BABA01000185.1|4.0 TMP01280;  ali follow..  15  67...................................................................TDSIILNNQKRVHGLSLPLRYTADSTVLVFHYSKDVKIKKDTIV............................................ 110
8 -2.510PB009534 gi|153852721|ref|ZP_01994158.1| hypothetical protein DORLON_00140 [Dorea longicatena DSM 13814]gi|149754363|gb|EDM64294.1| hypothetical protein DORLON_00140 [Dorea longicatena DSM 13814]  ali follow..  16  96..............GGVIHVAKIVMVVMISFFGMAFNNDVGVTKMFGQIYELLTGTK-IGIIIGILTFFNHFGKKRLSVDPTPMEVEMRLYENDI............................................................ 192
9 -2.480PB011023 A7V2G7_BACUN/1-167 PB011023; Pfam-B_11023;  ali follow..  9  1....MNILNNKNKRTSIFKALALCLFAAVSFTFVSCDDDMDIQQSYPFTVETMPVPNKVTKGQTVEIRCELKKTGDFANTLYTIRYFQFEGEGTLKMDNGIT..................................................... 98
10 -2.460HGC00429 gi|162734516|dbj|BAAZ01029480.1|1.0 TMP00411;  ali follow..  9  15...LFDNQCGFALGENSRA-----------FVTWQFNGQDGHRDYFWGHYMNEPDMAERDLLNRARDYQRRYHVEEVEQAPDKETYLYYSTQRPI--------DIGTYPNSYFNRPVHMDLYFTRQQVTGEIFHPLTER---EMQDYEL...... 150
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 8 3 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Grynberg M, Erlandsen H, Godzik A. HEPN: a common domain in bacterial drug resistance and human neurodegenerative proteins. Trends Biochem Sci. 2003 May;28(5):224-6. Review.